CN185309

Overview
NameCN185309
Unique NameCN185309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.359e-36
Identity = 73/182 (40.11%), Postives = 112/182 (61.54%), Query Frame = -3
Query:  189 KGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 734
            +G + A+F             + +GASRII VD+N  +F +AK+ G T+ +NPKD+ +P+ +V+  MT  GVD S E  G ++ M++A    H  +GV+V+VGVP         PM L + RT KG+ FG +K +  +P +V  YM K+  ++  ITHT+PFS+IN+ FDL+ AG+SIR ++
Sbjct:    2 RGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINSDKFAKAKELGATDCINPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPPAAQNITFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMKKKFVLDPLITHTLPFSKINEGFDLLRAGKSIRSVL 183          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36
Identity = 75/196 (38.27%), Postives = 121/196 (61.73%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            +TG GA VN AK   G + A+F             + +GASRIIGV  +  +F +A + G TE +NPKDYDKP+ +VI + TNGGVD +VEC G ++ M++A +  + G GV V++G+ + ++     P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAF+L+ +G+ +R I+
Sbjct:  177 ATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIM 371          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.256e-36
Identity = 73/202 (36.14%), Postives = 120/202 (59.41%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD---YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            +TG GA +  A  +KG +VA+F            A++ GAS+II +D+N  +     +FG T+FVNPK+    D+ + + + +MT+GG+D + +CTG+ + M  A E  H GWG ++++GV    +   T P  L+  R  KG+ FG  K RS++  +++ Y    L+VE+FITH  PF EIN+AF+ +  G+ +R +++ D
Sbjct:  182 TTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGATDFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIGVAAAGEEISTRPFQLVTGRVWKGSAFGGIKGRSEMGGLIKDYQKGALKVEEFITHRRPFKEINQAFEDLHNGDCLRTVLKSD 383          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.256e-36
Identity = 74/196 (37.76%), Postives = 116/196 (59.18%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +N AK   G + A+F             + +GA+RIIGVD+N  +F +A++ G TE +NP+D  KP+Q+V+ DMT+ G+D   E  G++  + +A    ++ +GV V+VG+       K       + R+LKG+ FG +K R  +P +V  YM K+L ++  ITHT+   +IN+A +LM  G+ IRCI+
Sbjct:  178 STGFGAAINTAKVTPGSTCAVFGLGGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGLLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAKKLNLDPLITHTLNLDKINEAVELMKTGKCIRCIL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35
Identity = 73/196 (37.24%), Postives = 113/196 (57.65%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA V   K K G +  +F             + +GASRIIG+DLN  +F +A   G TE ++PKD  KP+ +V+++MT   V  + E  G ++ MI A    H  +G +V+VGVP         PM L   RT KG  FG  K R D+P +V +++ K+ ++++ ITH +PF +I++ F+L+ +G+SIR ++
Sbjct:  177 STGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 372          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.425e-34
Identity = 77/200 (38.50%), Postives = 112/200 (56.00%), Query Frame = -3
Query:  183 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 776
            +TG GA +N AK  KG  + +F            A   GAS II +D+N S+   A +FG T+FVNP    +    V  + D+T+GG D + +CTG+VQ M +A E  H GWG ++++GV        T P  L+  R  +G  FG  K R+ +PS+V+ Y++ +++V++FITH      INKAF  M AG  IR +I M
Sbjct:  179 TTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVTGRVWRGCAFGGIKGRTQMPSLVQDYLDGKIKVDEFITHRHDLDNINKAFHDMHAGNCIRAVITM 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33
Identity = 77/198 (38.89%), Postives = 110/198 (55.56%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            +TG GA    A  +KG +VA+F                GA++II VD++  +    +K G T FVNP    +    V  + +MT+GG D + +CTG+V  M +A E  H GWG +V++GV        T P  L+  RT KG  FG  K RS LP +V  Y++ +L+VE+FITH  P + INKAF+ M AG+ IR ++
Sbjct:  181 TTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33
Identity = 72/197 (36.55%), Postives = 114/197 (57.87%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG-VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            +TG GA +N AK   G + A+F             + +GA+RII VD+N  RF +AK  G T+ V+P+D++KP+++V++DM +GGVD   E TG+ +A+ +A    H   GV V VG + +             + R LKG+  G +K + ++P +V  YM K+  ++  ITHT+  SE N+A  LM +G+ IRC++
Sbjct:  178 ATGYGAAINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDFEKPIEEVLSDMIDGGVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTKEEIPKLVSDYMAKKFNIDPLITHTLTLSEANEAVQLMKSGQCIRCVL 374          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.164e-33
Identity = 70/190 (36.84%), Postives = 111/190 (58.42%), Query Frame = -3
Query:  207 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 776
            STG GA +N AK   G + A+F             + +GA+RIIGVD+N  +F +A++ G TE +NP+D  KP+Q+V+ DMT+ G+D   E  G++  + +A    ++ +GV V+VGV       K       + R+LKG+ FG +K R  +P +V  YM ++L ++  ITHT+   +IN+A +LM  G+
Sbjct:  178 STGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMKTGK 367          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/199 (37.69%), Postives = 112/199 (56.28%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            +TG GA  + AK + G +VA+             A  +GASRII +D+N  +   AKKFG T+F++       VQ VI D+T+GGVD + +CTG+V  M    +  H GWG   ++GV          P  ++  R + G+ FG  K RS+LP+ V++YM    +V+++IT+  P   INKAFD M  G+ IRC++ M+
Sbjct:  179 TTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFIDSSKVKDLVQYVI-DVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDMN 376          
The following BLAST results are available for this feature:
BLAST of CN185309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_ANAPL2.359e-3640.11Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]
ADH8_RANPE3.081e-3638.27NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
FADH_YEAST5.256e-3636.14S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADH6_PONAB5.256e-3637.76Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH7_HUMAN1.529e-3537.24Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
FADH_PICPA6.425e-3438.50S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
FADH_CANMA1.096e-3338.89S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH6_RAT1.096e-3336.55Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH6_HUMAN4.164e-3336.84Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
FADH1_SCHPO2.067e-3237.69Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185309 ID=CN185309; Name=CN185309; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTATATGTAGAAAACACAACTCTCTTGAAAGCCCT
CTTTCAGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTA
ATATATAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGA
TTGATCAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCT
AATGCTTTCTCCCGCAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGA
AGGGCACAGTGTGAGTGATGAATTTCTCGACCTCCAACTCCTTGTTCATG
TATTTTTCAACAACAGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAA
GAAGGTACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCT
TGAATGCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCAA
CCATCGTGAACGCATTCAAATGCTGAAATCATGGCCTGGACGCTTCCAGT
ACATTCAACACTTCTATCCACTCCACCATTGGTCATGTCAGCAATCACCT
GTTGAACAGGTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCA
AACTTCTTGGCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGAT
CCTGGAAGCCCCTGATACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTG
CACCCAATCCAAAAATGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACA
TTAACAGTAGCCCCCAAACCTGTGGAGA
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