CN185309

Overview
NameCN185309
Unique NameCN185309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.351e-74
Identity = 134/199 (67.34%), Postives = 161/199 (80.90%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NV KPKKG +VAIF            AR+SGASRIIGVDLNP++  +AKKFG T+FVNPKD+ KPVQ+VI +MT+GGV+R+VECTG+  AMISAFECVHDGWGVA      +K+  FKTHPMN LNERTL+GTFFGNYKPR+ LP VV+ YM KELE++KFITH++PFS+IN AFDLML GE +RC+IR +
Sbjct:  180 STGLGATLNVTKPKKGMTVAIFGLGAVGLAAMEGARMSGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA------HKEAVFKTHPMNFLNERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVIRSE 372          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.277e-54
Identity = 102/199 (51.26%), Postives = 136/199 (68.34%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGA  N AK + G  VAIF            A+ +GASRIIG+D++  +F+ AK FGVTEFVNPKD+DKP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE++V++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  182 STGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.277e-54
Identity = 102/199 (51.26%), Postives = 136/199 (68.34%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGA  N AK + G  VAIF            A+ +GASRIIG+D++  +F+ AK FGVTEFVNPKD+DKP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE++V++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  182 STGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.774e-53
Identity = 99/195 (50.77%), Postives = 132/195 (67.69%), Query Frame = -3
Query:  189 TGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 773
            TGLGA  N AK + G +VAIF            A+ +GASRIIG+D++  ++  AKKFGV EFVNPKD+DKP+Q+VI D+T+GGVD S EC G+V  M +A EC H GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +VEKYMNKE++V+++ITH +   EINKAFDL+  G  +RC++
Sbjct:  181 TGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.348e-52
Identity = 98/195 (50.26%), Postives = 133/195 (68.21%), Query Frame = -3
Query:  189 TGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 773
            TGLGA  N AK + G  VAIF            A+ +GASRIIG+D++ ++++ AK FGVTEF+NPKD++KP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+ KE++V+++ITH +   EINKAFDL+  G+ +RC++
Sbjct:  180 TGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVL 374          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.006e-52
Identity = 95/196 (48.47%), Postives = 134/196 (68.37%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +N AK + G + A+F             +V+GA+RIIG+DLNP++F  AK+FG TEFVNPKD+ KP+Q+V+ +MT+GGVD S EC G+VQ M +A E  H GWG +V++GV        T P  L+  R  KGT FG +K    +P +VE YM+K+L+V++F+THT+PF +IN+ F+LM AG+SIR ++
Sbjct:  179 STGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.784e-51
Identity = 94/196 (47.96%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +N AK + G + A+F             +V+GA+RIIGVD+NP +F +A +FG TE +NPKD+ +PVQ+V+ +MT+GGVD S EC G+V+ M SA E  H GWG +V++GV        T P  L+  R  K T FG +K    +P +VE YMNK+L+V++F+THT+PF  IN+ FDLM AG+SIRC++
Sbjct:  178 STGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGKSIRCVL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 92/196 (46.94%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +N AK + G + A+F             + +GASRII +D+NP +F  AK+FG T+ VNPKD+ KPV+QV+ +MT+GGVD S EC G++  M +A E  H GWG +V++GV        T P  L+  RT KGT FG YK    +P +VE+YMNK+++V++F+THT+PF +I++ FDLM AG+SIR ++
Sbjct:  178 STGYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.896e-50
Identity = 92/198 (46.46%), Postives = 137/198 (69.19%), Query Frame = -3
Query:  183 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 776
            STG GA VN AK + G + AIF             +V+GASRIIGVD+N  +F +AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH++ F +IN+AF+LM AG+SIR ++++
Sbjct:  177 STGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 197.593 bits (501), Expect = 6.395e-50
Identity = 93/198 (46.97%), Postives = 134/198 (67.68%), Query Frame = -3
Query:  183 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 776
            STG GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF+LM +G+SIR ++++
Sbjct:  177 STGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
The following BLAST results are available for this feature:
BLAST of CN185309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH2_HORVU6.351e-7467.34Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_ORYSJ3.277e-5451.26Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI3.277e-5451.26Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH2.774e-5350.77Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA2.348e-5250.26Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_SPAAU4.006e-5248.47Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHH_GADMO5.784e-5147.96Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHL_GADMO2.198e-5046.94Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHX_HORSE4.896e-5046.46Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_HUMAN6.395e-5046.97Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185309 ID=CN185309; Name=CN185309; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTATATGTAGAAAACACAACTCTCTTGAAAGCCCT
CTTTCAGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTA
ATATATAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGA
TTGATCAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCT
AATGCTTTCTCCCGCAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGA
AGGGCACAGTGTGAGTGATGAATTTCTCGACCTCCAACTCCTTGTTCATG
TATTTTTCAACAACAGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAA
GAAGGTACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCT
TGAATGCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCAA
CCATCGTGAACGCATTCAAATGCTGAAATCATGGCCTGGACGCTTCCAGT
ACATTCAACACTTCTATCCACTCCACCATTGGTCATGTCAGCAATCACCT
GTTGAACAGGTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCA
AACTTCTTGGCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGAT
CCTGGAAGCCCCTGATACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTG
CACCCAATCCAAAAATGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACA
TTAACAGTAGCCCCCAAACCTGTGGAGA
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