CN185309

Overview
NameCN185309
Unique NameCN185309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.023e-39
Identity = 78/196 (39.80%), Postives = 121/196 (61.73%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            ++G GA +N AK   G + A+F             +++GASRII +D+N  +F +AK  G T+ +NP+D DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++KGTFFG +K    +P++V  Y NK+ +++  +TH +PF +IN A DLM  G+SIR I+
Sbjct:  182 TSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDINSEKFPKAKALGATDCLNPRDLDKPVQDVITELTGGGVDFSLDCAGTAQTLKAAVDCTVVGWGSCTVVGA--KVDEMNISTVDMILGRSVKGTFFGGWKSVDSVPNLVTDYKNKKFDLDLLVTHALPFDKINDAIDLMNQGKSIRTIL 375          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39
Identity = 79/196 (40.31%), Postives = 121/196 (61.73%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG G+ V VAK   G + A+F             + +GASRII VD+N  +F +AK+ G TE +NP+DY KP+Q+VI ++++GGVD S E  G +  +++A    H   G +V+VGVP    +   +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  IT+ +PF +IN+ FDL+ +G+SIR I+
Sbjct:  178 STGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFPKAKEVGATECINPQDYKKPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.977e-39
Identity = 81/197 (41.12%), Postives = 117/197 (59.39%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +  AK + G   A+F             + +GASRIIGVD+N  +F +AK+ G TE +NP D+ KP+ +V+ D+T G GVD S E  G  + MISAF   H   G +V+VGVP        +P+ L   RT KG  FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ FDL+ +G+SIR ++
Sbjct:  177 STGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.977e-39
Identity = 80/196 (40.82%), Postives = 118/196 (60.20%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA V  AK + G + A+F             + +GASRII +D+N  +F +AK+ G T+ VNPKD+ KP+ +V+ +MT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  +E  ITHT+PF +IN+ FDL+  G+SIR ++
Sbjct:  178 STGYGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.889e-39
Identity = 81/196 (41.33%), Postives = 115/196 (58.67%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG G+ VN  K K G + A+F             +V+GASRIIGVDLN  +F  AK+ G TE +NPKDY+ P+ +V+A MT+ GVD + E  G+   M SA    H G G  V+VG+          P+ +L  R L G  FG +K + D+P +V  Y+NK+ + +  ITH +PF +IN+ F+L+  G+SIR I+
Sbjct:  178 STGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.131e-38
Identity = 83/200 (41.50%), Postives = 121/200 (60.50%), Query Frame = -3
Query:  183 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK-PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 776
            STG+GA    AK +KG +V IF            AR+ GASRIIGVD+NP++F   +KFGVTEFVN    +K  V +VI +MT+GG D   EC GS   +  A+ C   GWG  + +GV            ++L+  + L G+ FG  K ++ +P ++++Y++ ELE++KF+TH + F EIN AF L+L G+ IRC++ M
Sbjct:  190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 1.131e-38
Identity = 80/196 (40.82%), Postives = 117/196 (59.69%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG G+ V V K  +G   A               + +GA+RII VD+N  +F +AK+ G TE VNP+DYDKP+ +V+ +MT+GGVD S E  G +   +SA  C  +  GV+V+VGVP    +    P  LL+ R+ KG  FG YK + D+P +V  +M K+  +E  IT+  P ++IN+ FDL+ AG+SIR ++
Sbjct:  178 STGYGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYEVLQEMTDGGVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPLAKINEGFDLLRAGKSIRTVL 373          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.478e-38
Identity = 84/200 (42.00%), Postives = 118/200 (59.00%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STG+GA   VA  +KG +VA+F            AR+ GA +IIGVDLNP +F   KKFG T+F+N     +  + +VI +MT GGVD S EC G    +  AF     G G  V++G+            +LL  R + G+ FG  KP+ D+P +V+ Y+ KEL ++ FITH + F EINKAFDL++ G+S+RCI+ M+
Sbjct:  189 STGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGKSLRCILWMN 388          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.478e-38
Identity = 77/196 (39.29%), Postives = 119/196 (60.71%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            S+G GA +N AK   G + A+F             +++GASRII +D+N  +F +AK  G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +++  +TH +PF  IN A DLM  G+SIR I+
Sbjct:  182 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 375          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.478e-38
Identity = 79/197 (40.10%), Postives = 119/197 (60.41%), Query Frame = -3
Query:  189 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 776
            STG GA +N AK + G + A+F             + +GASRIIG+D+N  +F +AK+ G TE VNP DY KP+ +V+ DMT+G GV+ S E  G    M +A    H+ +G +V+VGVP         P+ L   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ +G+SIR ++
Sbjct:  177 STGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          
The following BLAST results are available for this feature:
BLAST of CN185309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH4_RAT1.023e-3939.80Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADH1_RABIT1.746e-3940.31Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_NAJNA2.977e-3941.12Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_APTAU2.977e-3940.82Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_RANPE3.889e-3941.33Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADHL7_ARATH1.131e-3841.50Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH1_GEOAT1.131e-3840.82Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADHL5_ARATH1.478e-3842.00Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADH4_MOUSE1.478e-3839.29Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1B_UROHA1.478e-3840.10Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185309 ID=CN185309; Name=CN185309; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTATATGTAGAAAACACAACTCTCTTGAAAGCCCT
CTTTCAGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTA
ATATATAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGA
TTGATCAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCT
AATGCTTTCTCCCGCAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGA
AGGGCACAGTGTGAGTGATGAATTTCTCGACCTCCAACTCCTTGTTCATG
TATTTTTCAACAACAGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAA
GAAGGTACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCT
TGAATGCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCAA
CCATCGTGAACGCATTCAAATGCTGAAATCATGGCCTGGACGCTTCCAGT
ACATTCAACACTTCTATCCACTCCACCATTGGTCATGTCAGCAATCACCT
GTTGAACAGGTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCA
AACTTCTTGGCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGAT
CCTGGAAGCCCCTGATACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTG
CACCCAATCCAAAAATGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACA
TTAACAGTAGCCCCCAAACCTGTGGAGA
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