EY666545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_PROM9 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9312) GN=petC PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.207e-56 Identity = 98/176 (55.68%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 177 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFR E PWW Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWW 177
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_PROM0 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9301) GN=petC PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.577e-56 Identity = 99/176 (56.25%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 177 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFR E PWW Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWW 177
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_PROM2 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9215) GN=petC PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.059e-56 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 177 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 T + + VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFR E PWW Sbjct: 2 TQLSSKDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGGIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWW 177
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_PROMP (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.513e-56 Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 177 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL +H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +V++ V+ W+ETDFR E PWW Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWW 177
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_PROM5 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9515) GN=petC PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.588e-56 Identity = 97/176 (55.11%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 177 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +V++ V+ W+ETDFR E PWW Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLANHQAGDRSLVQGLKGDPTYLIVNSEGDIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWW 177
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_BIGNA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.130e-54 Identity = 106/211 (50.24%), Postives = 127/211 (60.19%), Query Frame = 3 Query: 75 KGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 +G + P +F +R K QA D VPDMGKR+LMN L+L AV+ Y +F PP G GG A DA+GN + A W +H R L +G+KGDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G VVRGPAP L LAH +NGK++ PWTETDFR GE PWW Sbjct: 41 RGKIAAPRTSFQNAVSRVSRNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMNNLVLAAVAPVVASAGGCYLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDLVQGIKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVRGPAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWW 251
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJB (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. GN=petC PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.454e-43 Identity = 84/161 (52.17%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 201 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFR 683 P M +R L+N LL G+V + L P +F PP G G G A+DA+G I ++ L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN EN F CPCHGSQY G+V+RGPAP SL L A V+ V F PW DFR Sbjct: 11 PPMSRRVLLNALLSGSVGVVVVGALYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNVGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJA (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain JA-3-3Ab) GN=petC PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.923e-43 Identity = 83/161 (51.55%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 201 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFR 683 P M +R +N LL +V + L P +F PP G AG G A+DA+G I ++ L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN+ EN F CPCHGSQY G+V+RGPAP SL L A V+ V F PW DFR Sbjct: 11 PPMSRRVFLNALLSSSVGVVVVGTLYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNAGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_GLOVI (Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter violaceus GN=petC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.937e-38 Identity = 80/168 (47.62%), Postives = 101/168 (60.12%), Query Frame = 3 Query: 189 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK---GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFR 683 A +P M +RQL++ + GA++ T L P +F PP G G AKD G DI + L PG+ LT GL GD TY+V+ K +A++GINAVCTHLGCVVPW++ +F CPCHGS YN G + RGPAP LAL A V + KV+ PWTE DFR Sbjct: 6 AQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDISVSKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWDNGAKQFKCPCHGSVYNADGGLERGPAPQPLALVKATVSDDKVLIAPWTEQDFR 172
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=petC1 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.937e-38 Identity = 79/169 (46.75%), Postives = 98/169 (57.99%), Query Frame = 3 Query: 201 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPG-LGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704 P +RQL+N L V++ FF PP G AGGG AKD +GN I A+ L PG R L GL GDPTYL+V++D +L S GI CTHLGC PWN + +F CPCHGS+Y+ G V RGPAPL L + V + ++ PWT+ D R GE PWW Sbjct: 10 PSYSRRQLLNFLAGTTVAVTASAGAYAMGKFFVPPAEKGGAGGGIIAKDVLGNPIPASQIL-AEAPGTRALVAGLAGDPTYLIVKEDGSLDSIGIVDSCTHLGCTFPWNGNDQEFQCPCHGSRYHPDGSVARGPAPLPLKIVQVAVVDDQIFISPWTDLDPRTGEKPWW 177 The following BLAST results are available for this feature:
BLAST of EY666545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666545 ID=EY666545; Name=EY666545; organism=Citrus sinensis; type=EST; length=922bpback to top |