CN185299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.144e-34 Identity = 85/171 (49.71%), Postives = 106/171 (61.99%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL---EEGSR--EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 M+ LI ++NK+Q LG LP I LE+IVG+DFLPRGSGIVTRRPL+LQL L ++GS+ E+ EFLH P F DF+ +R+EI +TDR TG+ K IS+ PI+L IYSP+VVNLTL+DLPG+TKV V QP I Q I MV Sbjct: 1 MDQLIPVINKLQDVFNTLGSDPL---------DLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIREEIIRDTDRMTGKNKGISAQPINLKIYSPHVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMV 162
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.898e-31 Identity = 82/182 (45.05%), Postives = 108/182 (59.34%), Query Frame = 2 Query: 158 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 +LI +VN++Q A + +G + L D LP I LE+IVG+DFLPRG+GIVTRRPLVLQL K + S E+ EFLH+P ++F +F +R+EI ET+ +TG+ ISSVPI+L IYSP+V+ LTL+DLPGLTKV V QP I + I MV Sbjct: 4 SLIKVVNQLQEAFSTVG-------VQNLID-LPQITVVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRPSASGKNEETTTDSDGKDQNNSSEWGEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMV 177
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.785e-31 Identity = 84/206 (40.78%), Postives = 108/206 (52.43%), Query Frame = 2 Query: 155 ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-----------------------------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 E+LIS +NK+Q A LG ++ LP I LE+IVG+DFLPRG+GIVTRRPLVLQL + E+ E+ EFLH+P K+F +F +RKEI ETD+ TG ISSVPI+L IYSP+V+ LTL+DLPGLTKV V QP I + I++M+ Sbjct: 3 EHLISTINKLQDALAPLGGGSQSPI------DLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRRPKKSEHAKVNQTANELIDLNINDDDKKKDESGKHQNEGQSEDNKEEWGEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDML 202
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.944e-31 Identity = 79/179 (44.13%), Postives = 104/179 (58.10%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+GIVTRRPL+LQL H +E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL I+SPNVVNLTL+DLPG+TKV V QP I I ++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSQEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELI 170
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.457e-31 Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI ++NK+Q +G A + LP IA LES+VG+D LPRG+GIVTRRPL+LQL ++ R E+ +FLH K +TDF +R+EI++ET+R +G K IS PIHL I+SP+VVNLTL+DLPG+TKV V QP I I ++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVDPEDRRKTSEENGVDGEEWGKFLHTKNKIYTDFDEIRQEIENETERVSGNNKGISDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIELQIRELI 169
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.185e-30 Identity = 81/205 (39.51%), Postives = 114/205 (55.61%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL--------------------------EEGSR-------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 +E+LI VNK+Q D S + TL LP +A LE++VG+DFLPRG+GIVTRRPLVLQL+ + E G++ E+ EFLHIP KRF DF +++EI++ET R G+ K IS +PI+L ++SP+V+NLTL+DLPG+TKV + QP I + I+N++ Sbjct: 4 LEDLIPTVNKLQ-------DVMYDSGIDTL--DLPILAVVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVLQLNNISPNSPLIEEDDNSVNPHDEVTKISGFEAGTKPLEYRGKERNHADEWGEFLHIPGKRFYDFDDIKREIENETARIAGKDKGISKIPINLKVFSPHVLNLTLVDLPGITKVPIGEQPPDIEKQIKNLI 199
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30 Identity = 77/185 (41.62%), Postives = 103/185 (55.68%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+G+VTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL ++SPNVVNLTL+DLPG+TKV V QP I I ++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENGKFQSWRVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELI 176
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.713e-29 Identity = 79/192 (41.15%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+GIVTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL I+SPNVVNLTL+DLPG+TKV V QP I I ++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVAPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELI 183
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29 Identity = 77/192 (40.10%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+G+VTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL ++SPNVVNLTL+DLPG+TKV V QP I I ++ Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELI 183
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.758e-28 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 116 PSPEIST*LREKM-ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR-----EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 PSP ST + ++I +VNK+Q LG + LP + LE++VG+DFLPRG+ I TRRPLVLQL + + + E+ EF H+P RF DF+ +R+EI+ ET+R G K ++ I L I SPNV+N+TL+DLPG+TKV V QP I I M+ Sbjct: 21 PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIA--------LPQVVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITKVPVGDQPSDIEARIRTMI 196 The following BLAST results are available for this feature:
BLAST of CN185299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185299 ID=CN185299; Name=CN185299; organism=Citrus sinensis; type=EST; length=652bpback to top |