CN185299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.681e-28 Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 2 Query: 107 LPPPSPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGS-----REYAEFLHI-PRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 LPP S T L ++I +VNK+Q LG + LP +A LE++VG+DFLPRG+ I TRRPL LQL + + S E+ EFLH P +R DF+ +R+EI+ ET+R +G K +S +PI L I+SPNV++++L+DLPG+TKV V QP I I M+ Sbjct: 6 LPPSSASAVTPLGS---SVIPIVNKLQDIFAQLGSQSTIA--------LPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITKVPVGDQPSDIEARIRTMI 181
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.726e-28 Identity = 83/202 (41.09%), Postives = 104/202 (51.49%), Query Frame = 2 Query: 152 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL-------------------------EEGSRE-----------YAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ME LI LVN++Q + + + + LP+I LE+IVGKDFLPRG+GIVTRRPL+LQL L E GS E YAEFLHIP +FTD VR EI++ET R G K I+ +PI+L IYS V+NLTLIDLPGLTK+ V QP I +++ Sbjct: 1 MEQLIPLVNQLQDLVY--------NTIGSDFLDLPSIVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHIPDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRSLI 194
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 75/190 (39.47%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 158 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR--------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 +L+ ++NK+Q +G +LP I LE++VG+DFLPRGSG+VTRRPLVLQL++ SR E+ EF H RF +F +++EI+ ET+R G K ISS PI L IYSP VV LTL+DLPGLT+VA+E QP I + I++M+ Sbjct: 136 SLLPIINKLQENAALIGSE----------ITLPQIIVVGSQSSGKSSVLENLVGRDFLPRGSGLVTRRPLVLQLYQTTTTSRNNVNENEDEDEDDNYYDNDNDDNSLEEWGEFGHTGTNRF-NFQEIKEEIERETERIAGPNKDISSEPIVLKIYSPKVVPLTLVDLPGLTRVAIEDQPPDIEEKIKSMI 314
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D A V K+I+D D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ Sbjct: 34 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRRQEGEEWYGKISYQDCEKEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQ 168
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 55/136 (40.44%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + EG Y + +I + D A V K+I++ ++ G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQ 166
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.930e-17 Identity = 68/171 (39.77%), Postives = 89/171 (52.05%), Query Frame = 2 Query: 146 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 E NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KLE+ + + R+ +D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R Sbjct: 31 ESKGNLYSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLEKEGEWKGKVSFLDREIEISDASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIR 198
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +E + + + + F D A V K+I++ D G IS I L I S NV +LTLIDLPG+ +VAV+GQP++I I+ ++R Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRSKEDEKWHGRISYQNHEEDFDDPAEVEKKIREAQDEMAGAGVGISEELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIR 170
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + D A V K+I++ D G IS I L I SP V +LTLIDLPG+ +VAV+GQP++I I+ +++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQ 166
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 54/136 (39.71%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG + + + + D + V K+I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I + I+ ++R Sbjct: 33 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWHGKISYQDHEEEIEDPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIR 167
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16 Identity = 54/136 (39.71%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D + V +I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQ 166 The following BLAST results are available for this feature:
BLAST of CN185299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185299 ID=CN185299; Name=CN185299; organism=Citrus sinensis; type=EST; length=652bpback to top |