CN185299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16 Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 146 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 E ++NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L +L++G + + ++ + + + V +EI + G +ISS I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ Sbjct: 27 ESVDNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLI 193
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 83.5741 bits (205), Expect = 1.001e-15 Identity = 71/183 (38.80%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 119 SPEIST*LREKME---NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 SPE S E ME NL S + R C L D +L D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL + + ++ D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R Sbjct: 13 SPESSLNGSEDMESKSNLYSQYEEKVRPCIDLID--SLRSLGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIR 192
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 2 Query: 143 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +E + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ +++ Sbjct: 28 QESVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLNEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIK 196
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.912e-15 Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + ++ R + + + F D A V K+I+ D G IS I L I S +V +LTLIDLPG+ +VAV+GQP++I I+ ++R Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRTKDQDRWHGRISYKTCEEDFDDPAEVEKKIRQAQDEMAGAGVGISEELISLQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIR 170
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.106e-14 Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAA-VRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + + A V K+I++ D+ G +I+ I L I SP+V +LTLI LPG+ +VAV+ QP++I I+ +++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQDYEEEIEVPADVEKKIREAQDKMAGNGVEIADDLISLEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQ 166
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14 Identity = 63/171 (36.84%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 143 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ Sbjct: 33 KDSVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLI 200
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 63/171 (36.84%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 143 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 649 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ Sbjct: 33 KDSLNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLI 200
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 58/139 (41.73%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL----HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PLVL+L HK G Y + +F D + V KEI+ + G+ IS I L I SP V +LTLIDLPG+T+VAV QP I I+ +++ Sbjct: 117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKRDPHKAWRGRISYRK----TELQFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIK 250
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVR 652 +LPAIA LE++ G LPRGSGIVTR PLVL+L KL+EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ +++ Sbjct: 35 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLKEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIK 169
BLAST of CN185299 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.204e-14 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 248 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENM 646 +LP+I LE+IVG +FLP+GS +VTRRP+ L L + + Y EF + + TDF+ + + I + + ++ + PI L+IY+ ++ NL+LIDLPG ++ E QP + I + Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSADTAIPYGEFSGVQLGKITDFSKI-QHILTDLNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKL 393 The following BLAST results are available for this feature:
BLAST of CN185299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185299 ID=CN185299; Name=CN185299; organism=Citrus sinensis; type=EST; length=652bpback to top |