CN185290

Overview
NameCN185290
Unique NameCN185290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.420e-34
Identity = 81/178 (45.51%), Postives = 112/178 (62.92%), Query Frame = -2
Query:  388 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 918
            VEPE+L+DG HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  200 VEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.436e-33
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = -2
Query:  445 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 918
            VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  176 VEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33
Identity = 75/160 (46.88%), Postives = 108/160 (67.50%), Query Frame = -2
Query:  445 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 918
            VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++   + + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  176 VEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 76/160 (47.50%), Postives = 105/160 (65.62%), Query Frame = -2
Query:  445 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 918
            VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  176 VEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.309e-33
Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = -2
Query:  388 LLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 795
            LLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.535e-30
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = -2
Query:  523 HHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 819
            H++ LEGTLLKPNMVT G   PK  TPE IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 4.324e-30
Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = -2
Query:  427 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 918
            +EPEI++DG H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+  A K  PE +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  222 LEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN185290 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.470e-25
Identity = 58/143 (40.56%), Postives = 87/143 (60.84%), Query Frame = -2
Query:  493 VEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 918
            VEPE+ ++G + + +  +VT ++L+   K LN   V + G L+K + VT G  +  K TP+ +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  178 VEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN185290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC_CHLRE8.420e-3445.51Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC1.436e-3348.13Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT1.876e-3346.88Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP5.457e-3347.50Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALDOC_CHICK9.309e-3353.28Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_LYMST2.535e-3067.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALFC_SPIOL4.324e-3045.45Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_ENCCU5.470e-2540.56Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185290 ID=CN185290; Name=CN185290; organism=Citrus sinensis; type=EST; length=919bp
GGGGAGCGTGAGGGCCGCCTTTTGTCAAAACCTCTTCATTTATTCAGTGA
ATCAGCCAAGATATAATCACATGTCGATAAAGCAACGCATTAGAAAAGAA
CCGAAAGCAATAAGCACAAGAAAACATTATCAATTATGTGACAAAATCAC
AGAAATTTAGCGCCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAG
CATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTT
CCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGA
ATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGT
TCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCC
TTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTT
GTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAG
CAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGA
GTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTT
CTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCT
CACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATA
GTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAAC
TTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTAC
CCTCAAGAAGGACATGGTGGTCATTCAGAGCCTTGTAGCATGCAGCAAGA
ACACGCTCGGTCACATCAGCACACTTGTTGATGTCATGGGGACCGTCAAC
AAGGATCTCAGGTTCAACA
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