CN185274

Overview
NameCN185274
Unique NameCN185274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_GLUOX (Adenine phosphoribosyltransferase OS=Gluconobacter oxydans GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.194e-33
Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = -1
Query:  272 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 751
            IPDFPK GI+F DI+TL+    A++                ++AGIE+RGF+   P+AL +G  F  +RKP KLPG+ IS +Y LEYG+D + +   A++ G+R +++DDL+ATGGTL+A+I LL +VG  VV  + +IEL +LKGRE+L + PL  L++
Sbjct:   18 IPDFPKRGILFYDISTLIRSPDAWQVATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIELADLKGREKL-DVPLNALMT 176          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_BACSK (Adenine phosphoribosyltransferase OS=Bacillus clausii (strain KSM-K16) GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.194e-33
Identity = 71/160 (44.38%), Postives = 105/160 (65.62%), Query Frame = -1
Query:  272 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 751
            + D+P+ GI F+DITTL+ +  A++  ++      K+K   V+ G EARGF+ G PIA  +   FVP+RK  KLP EVI   Y LEYGKD + +H  ++Q G+R +I DDL+ATGGT+ A  +++E++G  VV  A +IEL  + GR++L +  LF L+S
Sbjct:   10 VEDWPQEGIRFKDITTLMQNGTAYKRAVEELAVYAKEKQADVIVGPEARGFVVGCPIATELEIGFVPVRKKGKLPREVIEANYGLEYGKDCLTIHKDSIQPGQRVVITDDLLATGGTIEATAKMVEQLGGKVVGIAFLIELAYIGGRDKLKQYDLFSLMS 169          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SALAI (Adenine phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 73/160 (45.62%), Postives = 96/160 (60.00%), Query Frame = -1
Query:  272 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 751
            +PDFPKPG+MF+D+  L  D   FR+ ID  V  Y   +   V GIEARGF+    IA A G   VP+RK  KLP    S  Y+LEYG+  +E+H  A  AG R L+VDD++ATGGT  A + L+ER G  V     ++EL  L GRERL  + +  L++
Sbjct:   28 VPDFPKPGVMFKDLMPLFADGDTFREVIDGIVRHYGRDSFDAVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLPRVAYSASYALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAQATLDLVERAGGTVAGFTVLLELGFLGGRERLAPRAVHALLT 187          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_PSESM (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = -1
Query:  296 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 751
            + DFPKPG++F+DIT L    KA R  ID FV+RY D + S +  ++ARGF+ G  +A  +    V  RK  KLP +V+SE Y  EYG+  +E+H  ++  G   ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G +RL +
Sbjct:   15 VVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDADFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGNSVIMFDDLIATGGTLIAAANLIRRMGAQVHEAAAIIDLPELGGSKRLND 166          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_FRASN (Adenine phosphoribosyltransferase OS=Frankia sp. (strain EAN1pec) GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = -1
Query:  299 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 751
            + DFPKPG++F+DIT LL    AF   +    +  +    + +AGIEARGF+   P+A  +GA  VP+RK  KLPG   SE Y+LEYG  V+E+H  AV  GER LIVDD++ATGGT +AA  LL   G  VV  A ++EL  L GR+R G
Sbjct:   24 VMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTG 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_CLAM3 (Adenine phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            +PDFP+PGI+F+D+T +L D  A R  +D  V       +  VAG+EARGF+     A A G   + +RK  KLPGEV+ E Y+LEYG+  +E+H G +  G R L++DD++ATGGTL AA RLLER G  V     V+EL +L GRERL
Sbjct:   17 VPDFPQPGILFRDLTPVLADGPALRAVVDDLVAACGP--VDAVAGVEARGFLLAAAAAYASGVGTLAVRKAGKLPGEVLRETYALEYGEAAIELHPGQLAPGSRVLLLDDVLATGGTLEAAARLLERAGYEVAGIGVVLELADLGGRERL 164          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_OENOB (Adenine phosphoribosyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=apt PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.860e-33
Identity = 68/151 (45.03%), Postives = 104/151 (68.87%), Query Frame = -1
Query:  296 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 748
            PDFP+ G+MF+DI  L+ +  A+R  I+  ++  +     ++AG EARGF+ G P+A A+G  FVP RK  KLP + +S  YSLEYGK+ ++MHV +++ G+R  IVDDL+ATGGT++A + L+ ++G  VV     IEL +L+GR+++ E
Sbjct:   13 PDFPEKGVMFRDINPLIGNGPAYRQAINELIDFARPLKPDIIAGPEARGFVVGSPMAYALGIGFVPARKYGKLPRKSVSSSYSLEYGKNELQMHVDSIKPGQRVFIVDDLLATGGTITATMDLVRQLGGQVVGTGFFIELADLQGRKKIME 163          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SCHPO (Adenine phosphoribosyltransferase OS=Schizosaccharomyces pombe GN=apt1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = -1
Query:  302 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 748
            PDFPK GI+F+DI  +  D +AF   IDL +E  + +  NI V+ G+EARGF+FGP +AL     FVP+RKP KLPG+++   Y+ EY  D   +  G ++ G+R LIVDD++ATGGT  AA  L+ R+G  +V    ++EL  L+GR+RL
Sbjct:   17 PDFPKKGILFEDIMPIFQDPRAFGILIDLLLEAVETEFNNIDVIVGLEARGFLFGPTLALRANCAFVPVRKPNKLPGDLVVVSYNKEYSTDSFAIQKGTIKPGQRVLIVDDILATGGTALAADELVTRLGGELVGHLFLLELTFLQGRKRL 167          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_NOCSJ (Adenine phosphoribosyltransferase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=apt PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 73/164 (44.51%), Postives = 104/164 (63.41%), Query Frame = -1
Query:  272 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN----ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 751
            +PDFP+PGI+F+DIT LL +  A    +       +D+     +  V G+E+RGFI G P+ALA+G  FVP+RK  KLP    +  Y+LEYG+  +E+H  A++ G+R L+VDD++ATGGT  A I L+E+ G  V   A ++EL  L GRE LG  PL  L++
Sbjct:   21 VPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTGAPVVDKVLGMESRGFILGAPVALALGVGFVPVRKAGKLPRATYAVSYALEYGEATLEVHQDALEPGDRVLLVDDVLATGGTARATIDLVEKCGASVHAVAILMELGFLPGREALGTVPLTTLLT 184          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_LEUMM (Adenine phosphoribosyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=apt PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 71/163 (43.56%), Postives = 108/163 (66.26%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY-GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---GEKPLFVLV 751
            + D+P+PG+ F+DI+ L+ D  A++  +D   +  K  N+ ++AG E+RGFI G P+A A+   FVP RK  KLP E +S  Y+LEY G + +E+H  A++ G+R LIVDDL+ATGGT++A   ++E++G  V   A +IEL  L+GRE++   GE P   L+
Sbjct:   12 VEDYPEPGVSFRDISPLMGDGVAYKQAVDAIADFAKHLNVDLIAGPESRGFIVGSPLAYAMNIGFVPARKGGKLPREAVSASYTLEYGGVNELEIHKDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELESLQGREKIMKAGEVPFLALM 174          
The following BLAST results are available for this feature:
BLAST of CN185274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_GLUOX5.194e-3345.63Adenine phosphoribosyltransferase OS=Gluconobacter... [more]
APT_BACSK5.194e-3344.38Adenine phosphoribosyltransferase OS=Bacillus clau... [more]
APT_SALAI6.784e-3345.63Adenine phosphoribosyltransferase OS=Salinispora a... [more]
APT_PSESM6.784e-3345.39Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_FRASN6.784e-3349.01Adenine phosphoribosyltransferase OS=Frankia sp. (... [more]
APT_CLAM36.784e-3348.67Adenine phosphoribosyltransferase OS=Clavibacter m... [more]
APT_OENOB8.860e-3345.03Adenine phosphoribosyltransferase OS=Oenococcus oe... [more]
APT_SCHPO1.157e-3247.02Adenine phosphoribosyltransferase OS=Schizosacchar... [more]
APT_NOCSJ1.157e-3244.51Adenine phosphoribosyltransferase OS=Nocardioides ... [more]
APT_LEUMM1.157e-3243.56Adenine phosphoribosyltransferase OS=Leuconostoc m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185274 ID=CN185274; Name=CN185274; organism=Citrus sinensis; type=EST; length=751bp
CCCCCCTCTGAAGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTT
TCATAAGCCTATCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTT
CCCCACCACTCTTTCCCCAACCTCTTAAATAAAATAAAAAGCCAATGAAA
CTGCTCTTATATTAATCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCA
GAGCCCGAGCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAAC
CATAAACTGAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTC
CCAGCCGTTCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACAC
TCAACCACATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAA
GGTCCCACCAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTG
CTTGTACAGCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAG
GAATACTCTTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCAT
AGGAACAAACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAA
AACCCCTAGCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTAC
CTCTCAACGAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAG
CAATGTTGTGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGA
T
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