CN185274

Overview
NameCN185274
Unique NameCN185274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_CITK8 (Adenine phosphoribosyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=apt PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.903e-43
Identity = 81/153 (52.94%), Postives = 116/153 (75.82%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL ++
Sbjct:   18 IHDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLAKQ 170          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SHEPA (Adenine phosphoribosyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=apt PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.246e-43
Identity = 82/150 (54.67%), Postives = 113/150 (75.33%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IP++PK GI+F+D+T+LL D +A++ TI L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+ A ++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G ERL
Sbjct:   18 IPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPDLGGEERL 167          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_PHOPR (Adenine phosphoribosyltransferase OS=Photobacterium profundum GN=apt PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.246e-43
Identity = 82/150 (54.67%), Postives = 113/150 (75.33%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            I D+PKPGI+F+D+T+L+ D +A+R T+ + +ERY +  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP EVISE Y LEYGKD++E+HV A+  G++ L+VDDL+ATGGT+ A  +L  R+G  V + A VI LP++ G ERL
Sbjct:    9 ISDYPKPGILFRDVTSLMEDPEAYRATMQVLIERYSNTGITKVIGTEARGFLFGAPLALELGVGFVPVRKPGKLPREVISESYELEYGKDILEIHVDAIVEGDKVLLVDDLLATGGTIEATTKLARRLGGVVEDAAFVINLPDIGGAERL 158          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_CLONN (Adenine phosphoribosyltransferase OS=Clostridium novyi (strain NT) GN=apt PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.246e-43
Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            I  FPK GI F+DITT+L D +A + T+D  VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP E IS EY LEYG DV+++H  A++ G++  IVDDL+ATGGT+++ I ++E++G  VV    +IEL +LKGRE++G   +  LV
Sbjct:   10 IEGFPKEGISFKDITTVLNDKEALKYTVDAIVEHLKDKNVDVVVGPEARGFLFGTPVAYALGAAFVPVRKKGKLPCETISSEYDLEYGSDVLQIHKDAIKKGQKVAIVDDLLATGGTMNSVIEMIEKLGGEVVSVDFLIELTDLKGREKIGNYDIMSLV 168          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_YERPY (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 80/153 (52.29%), Postives = 112/153 (73.20%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   22 IPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_YERPS (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 80/153 (52.29%), Postives = 112/153 (73.20%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   22 IPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_YERPB (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 80/153 (52.29%), Postives = 112/153 (73.20%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   22 IPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_YERP3 (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 80/153 (52.29%), Postives = 112/153 (73.20%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   22 IPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_ENT38 (Adenine phosphoribosyltransferase OS=Enterobacter sp. (strain 638) GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   18 IQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALEMGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRL 167          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_AERS4 (Adenine phosphoribosyltransferase OS=Aeromonas salmonicida (strain A449) GN=apt PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.239e-43
Identity = 80/150 (53.33%), Postives = 110/150 (73.33%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PKPGI+F+DIT+L+ + +AF+ TIDL  E Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  V + A +I LP L G  RL
Sbjct:   16 IPDYPKPGILFRDITSLIENAEAFKATIDLLAEHYRDQGITKIVGTEARGFIFGAPVAFAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFIISLPSLGGDARL 165          
The following BLAST results are available for this feature:
BLAST of CN185274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CITK81.903e-4352.94Adenine phosphoribosyltransferase OS=Citrobacter k... [more]
APT_SHEPA3.246e-4354.67Adenine phosphoribosyltransferase OS=Shewanella pe... [more]
APT_PHOPR3.246e-4354.67Adenine phosphoribosyltransferase OS=Photobacteriu... [more]
APT_CLONN3.246e-4353.46Adenine phosphoribosyltransferase OS=Clostridium n... [more]
APT_YERPY4.239e-4352.29Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_YERPS4.239e-4352.29Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_YERPB4.239e-4352.29Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_YERP34.239e-4352.29Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_ENT384.239e-4354.00Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_AERS44.239e-4353.33Adenine phosphoribosyltransferase OS=Aeromonas sal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185274 ID=CN185274; Name=CN185274; organism=Citrus sinensis; type=EST; length=751bp
CCCCCCTCTGAAGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTT
TCATAAGCCTATCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTT
CCCCACCACTCTTTCCCCAACCTCTTAAATAAAATAAAAAGCCAATGAAA
CTGCTCTTATATTAATCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCA
GAGCCCGAGCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAAC
CATAAACTGAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTC
CCAGCCGTTCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACAC
TCAACCACATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAA
GGTCCCACCAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTG
CTTGTACAGCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAG
GAATACTCTTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCAT
AGGAACAAACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAA
AACCCCTAGCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTAC
CTCTCAACGAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAG
CAATGTTGTGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGA
T
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