CN185274

Overview
NameCN185274
Unique NameCN185274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.233e-42
Identity = 81/150 (54.00%), Postives = 112/150 (74.67%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   18 IQDYPKPGILFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_AERHH (Adenine phosphoribosyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=apt PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.233e-42
Identity = 80/150 (53.33%), Postives = 109/150 (72.67%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PKPGI+F+DIT+L+ +  AF+ TIDL    Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  VV+ A +I LP L G  RL
Sbjct:   16 IPDYPKPGILFRDITSLIENADAFKATIDLLANHYRDQGITKIVGTEARGFIFGAPVAYAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVVDAAFIISLPSLGGDARL 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_HERA2 (Adenine phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=apt PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.611e-42
Identity = 83/159 (52.20%), Postives = 115/159 (72.33%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            IPDFP PG+ F+DIT LL + +AF   I+ F +RY ++ +  + GIE+RGFIFG P+AL +G  FVP+RKP KLP + I  +YSLEYG + +E+H  A+QAG+R ++VDDL+ATGGT+ AA  LL ++G  VVE A +IEL  L GRE+LG +P +  +
Sbjct:   12 IPDFPIPGVQFKDITPLLGNAQAFDAAIEHFAQRYANQQLQAIVGIESRGFIFGAPLALRLGIGFVPIRKPGKLPAQTIGVDYSLEYGTNRLEIHNDALQAGDRVVVVDDLLATGGTVVAACDLLNQLGAEVVEAAFLIELTFLGGREKLGNRPFYAQI 170          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_PSEHT (Adenine phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 76/158 (48.10%), Postives = 116/158 (73.42%), Query Frame = -1
Query:  278 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 751
            I D+PK GIMF+D+TTL+ +  AF+ TID F+  YKD+  + + G E+RGFIFG P++ A+G  F+P+RKP KLP EV+ ++Y LEYG+D +E+HV A+  G++ L+VDDL+ATGGT+ A I+L++++G    + A V+ LPEL G +R+ +  + +L
Sbjct:   16 IADYPKAGIMFRDVTTLMANPDAFKATIDAFIAAYKDQGFTKIIGTESRGFIFGAPLSYALGIPFIPVRKPGKLPREVVRQDYLLEYGEDTLELHVDAIVPGDKVLLVDDLLATGGTIEATIKLVQKLGGEATDAAFVVSLPELGGEKRIAKMGIKIL 173          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_DESHY (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 84/159 (52.83%), Postives = 111/159 (69.81%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            I DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +SE Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+RL    +F L+
Sbjct:   13 IDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRLEGYEVFSLI 171          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_DESHD (Adenine phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 84/159 (52.83%), Postives = 111/159 (69.81%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            I DFPKPGI F+DITTLL D +A+R  +D  VER ++    ++ G EARGF+ G P+A A+G  FVP+RKP KLPG+ +SE Y LEYG D +E+H  A+Q G+R  IVDDL+ATGGT SA  RL+E+ G  V   + +IEL  L+GR+RL    +F L+
Sbjct:   10 IDDFPKPGISFKDITTLLKDGEAYRAAVDAIVERVRESQPDLIVGPEARGFLLGAPVAYALGIGFVPVRKPGKLPGKTVSETYELEYGSDTLEVHADAIQPGQRIAIVDDLLATGGTTSATARLIEKTGAQVAGMSFLIELGFLEGRKRLEGYEVFSLI 168          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_CLOBB (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  296 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 751
            I  FPK GI F+DITTL+ D +  + +ID+FVE  KDKN+ ++ G EARGFIFG P+A A+GA FVP+RKP KLPGE IS  Y LEYG D +++H  +++ G+R  IVDDL+ATGGT+    +L+E  G  VV  A +IEL +LKGR++LG+
Sbjct:   10 IDGFPKEGISFKDITTLIGDGEGLKASIDMFVEYLKDKNVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFLIELIDLKGRDKLGD 161          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SERP5 (Adenine phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.589e-42
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PKPGI+F+D+T+LL +  A+  +I+L VER+++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   +SE Y LEYG D +E+H  A+ AG++ L+VDDL+ATGGT+ A  +L+ R+G  V + A +I LP+L G  RL
Sbjct:   33 IPDYPKPGILFRDVTSLLENPLAYAASIELLVERFREAGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLSESYELEYGTDKLEIHTDAISAGDKVLVVDDLLATGGTIEATAKLIRRLGGEVTDAAFIINLPDLGGEARL 182          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_YERE8 (Adenine phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.687e-42
Identity = 77/153 (50.33%), Postives = 112/153 (73.20%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PK GI+F+D+T+LL D  A+  +I+L  ERY DK ++ V G EARGF+FG P+AL++G  FVP+RKP KLP   ISE Y LEYG D +E+H  +++ G++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G  RL ++
Sbjct:   22 IPDYPKAGILFRDVTSLLEDPLAYAASIELLTERYLDKGVTKVVGTEARGFLFGAPVALSLGVGFVPVRKPGKLPRATISESYELEYGTDKLEIHTDSIKPGDKVLVIDDLLATGGTIEATVKLIRKLGGEVTDAAFVINLPDLGGEARLNDQ 174          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_ERWCT (Adenine phosphoribosyltransferase OS=Erwinia carotovora subsp. atroseptica GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.687e-42
Identity = 79/152 (51.97%), Postives = 110/152 (72.37%), Query Frame = -1
Query:  296 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 751
            IPD+PKPGI+F+D+T+LL D  A+  +ID+   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   ISE Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G +RL E
Sbjct:   20 IPDYPKPGILFRDVTSLLEDPVAYAASIDMLANRYRNTGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTISESYELEYGSDTLEIHADAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRLTE 171          
The following BLAST results are available for this feature:
BLAST of CN185274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALAR1.233e-4254.00Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_AERHH1.233e-4253.33Adenine phosphoribosyltransferase OS=Aeromonas hyd... [more]
APT_HERA21.611e-4252.20Adenine phosphoribosyltransferase OS=Herpetosiphon... [more]
APT_PSEHT2.748e-4248.10Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_DESHY2.748e-4252.83Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_DESHD2.748e-4252.83Adenine phosphoribosyltransferase OS=Desulfitobact... [more]
APT_CLOBB2.748e-4254.61Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_SERP53.589e-4252.00Adenine phosphoribosyltransferase OS=Serratia prot... [more]
APT_YERE84.687e-4250.33Adenine phosphoribosyltransferase OS=Yersinia ente... [more]
APT_ERWCT4.687e-4251.97Adenine phosphoribosyltransferase OS=Erwinia carot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185274 ID=CN185274; Name=CN185274; organism=Citrus sinensis; type=EST; length=751bp
CCCCCCTCTGAAGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTT
TCATAAGCCTATCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTT
CCCCACCACTCTTTCCCCAACCTCTTAAATAAAATAAAAAGCCAATGAAA
CTGCTCTTATATTAATCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCA
GAGCCCGAGCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAAC
CATAAACTGAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTC
CCAGCCGTTCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACAC
TCAACCACATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAA
GGTCCCACCAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTG
CTTGTACAGCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAG
GAATACTCTTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCAT
AGGAACAAACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAA
AACCCCTAGCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTAC
CTCTCAACGAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAG
CAATGTTGTGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGA
T
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