CN185274

Overview
NameCN185274
Unique NameCN185274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_ACIC5 (Adenine phosphoribosyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.687e-42
Identity = 81/159 (50.94%), Postives = 109/159 (68.55%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            +PDFPKPGI+F DITTLL D + F   ID   E Y  KNI +V GIEARGFIFGP +A  + A FVP+RKP+KLP   +   Y LEYG D +E+H  A++ G+R ++VDDL+ATGGT+ A ++L+ ++G  +   A  +EL  LKGRER  +  +F L+
Sbjct:   19 VPDFPKPGILFYDITTLLKDRQGFAKLIDALAEHYIGKNIDLVLGIEARGFIFGPALAYRLNAGFVPVRKPRKLPARTVRVTYDLEYGSDTLEIHEDAIEPGQRIVLVDDLLATGGTMEATVKLVRQLGGEIAGLAFAVELDFLKGRERFPDLDVFSLL 177          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_VIBCM (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   16 IPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_VIBCH (Adenine phosphoribosyltransferase OS=Vibrio cholerae GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   16 IPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_VIBC3 (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++ Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:   16 IPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SOLUE (Adenine phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 88/159 (55.35%), Postives = 106/159 (66.67%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            +PDFPKPGI+F DITTLL D   F   ID   + Y+D  +  V GIEARGFIF P +A A+GA FVP+RKPKKLP E +   Y LEYG D +EMH  A+  G R LIVDDL+ATGGT SAA R+++  G  VV    VIEL  L GR+RL    +F L+
Sbjct:   11 VPDFPKPGILFYDITTLLKDPSGFHGVIDGLKDHYRDIKVDTVLGIEARGFIFAPALAYALGAGFVPVRKPKKLPAECVRITYDLEYGTDTLEMHKDAIGNGHRVLIVDDLLATGGTASAAARMVQDAGGIVVGLGFVIELTFLAGRQRLNGHDVFSLL 169          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SHEPW (Adenine phosphoribosyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = -1
Query:  278 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 751
            IPD+PK GI+F+D+T+LL D +A++ TI L VE YK++  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L+VDDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL    L +L
Sbjct:   18 IPDYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKEQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAITKEDKVLVVDDLLATGGTIEATVKLIRNLGGQVNHAAFVISLPDLGGEKRLETMDLELL 175          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_CLOTE (Adenine phosphoribosyltransferase OS=Clostridium tetani GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            I  FPK GI F+D+TT+L + +AF+ TID  VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP   IS +Y LEYG D +EMH  +++ G+R +I DDL+ATGGT+ + I ++E +G  +V    +IEL +LKGRE+LG+  +  LV
Sbjct:   10 IQGFPKEGISFKDVTTILQEKEAFKYTIDTLVEELKDKNVDVVVGPEARGFLFGAPLAYALGAGFVPVRKKGKLPSTTISSKYELEYGSDELEMHKDSIKPGQRVVIADDLLATGGTICSVIEMIESLGGEIVSINFLIELTDLKGREKLGKYDISSLV 168          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.044e-41
Identity = 81/150 (54.00%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+PKPG++F+DITTLL +  A++ TIDL VERY+ K I+ + G EARGF+FG P+AL +G  F+P+RK  KLP E +SE Y+LEYG D +EMH  +V+  ++ L++DDL+ATGGT+ A +RL+ R+G  V E A +I L  L G ERL
Sbjct:   18 IPDYPKPGVLFRDITTLLDNPLAYQATIDLLVERYQGKGITKIVGTEARGFLFGAPVALRLGVGFIPVRKAGKLPRETLSETYNLEYGTDTLEMHKDSVRENDKVLVIDDLLATGGTVEATVRLIRRLGGEVSEAAFIIGLLGLGGVERL 167          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_HAES2 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=apt PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.044e-41
Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  296 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 751
            IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++ Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G  RL E
Sbjct:   14 IPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_HAES1 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 129Pt) GN=apt PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.044e-41
Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  296 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 751
            IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++ Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G  RL E
Sbjct:   14 IPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
The following BLAST results are available for this feature:
BLAST of CN185274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ACIC54.687e-4250.94Adenine phosphoribosyltransferase OS=Acidobacteriu... [more]
APT_VIBCM6.122e-4252.00Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBCH6.122e-4252.00Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBC36.122e-4252.00Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_SOLUE6.122e-4255.35Adenine phosphoribosyltransferase OS=Solibacter us... [more]
APT_SHEPW6.122e-4252.53Adenine phosphoribosyltransferase OS=Shewanella pi... [more]
APT_CLOTE6.122e-4252.20Adenine phosphoribosyltransferase OS=Clostridium t... [more]
APT_PHOLL1.044e-4154.00Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_HAES21.044e-4153.95Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_HAES11.044e-4153.95Adenine phosphoribosyltransferase OS=Haemophilus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185274 ID=CN185274; Name=CN185274; organism=Citrus sinensis; type=EST; length=751bp
CCCCCCTCTGAAGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTT
TCATAAGCCTATCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTT
CCCCACCACTCTTTCCCCAACCTCTTAAATAAAATAAAAAGCCAATGAAA
CTGCTCTTATATTAATCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCA
GAGCCCGAGCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAAC
CATAAACTGAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTC
CCAGCCGTTCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACAC
TCAACCACATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAA
GGTCCCACCAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTG
CTTGTACAGCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAG
GAATACTCTTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCAT
AGGAACAAACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAA
AACCCCTAGCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTAC
CTCTCAACGAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAG
CAATGTTGTGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGA
T
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