CN185254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = -3 Query: 400 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 675 G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 74 GKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG+F + + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +VLL++ LL PNP+ L E + Y A+ +T+ +A Sbjct: 60 GGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15 Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 412 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 678 GG F + FP DYP KPPK+ F ++++HPNI+ G++C+ IL +E+W P T+ +LLS+ S+LTDPN + P + A M + + A+++ Sbjct: 50 GGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 421 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 669 + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 421 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 669 + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 421 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 669 + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = -3 Query: 379 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 675 GV+ + + P +YP+K P + F K+FHPNI+ ++GSICLD++ WSP + ++ I LL +PN DPL E A + DK YE + + KYA Sbjct: 47 GVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA 147
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = -3 Query: 424 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 678 G + +++ F DYPFK PKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ + + Sbjct: 82 GTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQE 166
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = -3 Query: 385 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 675 GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 52 GVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 385 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--------WSPALTISKVLLSICSLLTDPNPDDPLVPEIAH-----MYKSDKAKYESTARSWTQK 678 GG+F I FPP+YP++PPK+ F ++++HPNI +G +C+ IL WSPA I VLLS+ SL +PN D P + A M+K D Y + +K Sbjct: 47 GGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKK 157 The following BLAST results are available for this feature:
BLAST of CN185254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185254 ID=CN185254; Name=CN185254; organism=Citrus sinensis; type=EST; length=683bpback to top |