CN185254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12 Identity = 33/111 (29.73%), Postives = 57/111 (51.35%), Query Frame = -3 Query: 385 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 678 GG F + FP +YP PP V F + ++HPN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E A ++ + +++ +K Sbjct: 51 GGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRK 161
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 78 GGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 184
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 34/100 (34.00%), Postives = 54/100 (54.00%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F + D+P PPK F TK+FHPN++ G IC++ LK+ W+ L + +LL+I LL PN + L + + + + Y A+ +T +A Sbjct: 55 GGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKLFTSIHA 154
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 78 GGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 78 GGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 32/110 (29.09%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 385 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL------------DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 678 GG F + FP +YP PP V F ++++HPN+ +G +C+ ++ E+W+P T+ ++LSI S+L+ PN + P E A ++ + +++ R +K Sbjct: 54 GGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRK 163
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 78 GGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + DK + + + + + YA Sbjct: 78 GGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIKNYA 184
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 32/103 (31.07%), Postives = 53/103 (51.46%), Query Frame = -3 Query: 415 AGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 681 AG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 81 AGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG F I P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DPL E A + DK + + ++YA Sbjct: 78 GGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYA 184 The following BLAST results are available for this feature:
BLAST of CN185254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185254 ID=CN185254; Name=CN185254; organism=Citrus sinensis; type=EST; length=683bpback to top |