CN185254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23 Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = -3 Query: 376 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 678 GG F + + P +YP PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + + AR WT+KYA+ Sbjct: 48 GGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = -3 Query: 379 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 675 G+F + ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + ++ ++ AR WT+ YA Sbjct: 50 GIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23 Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = -3 Query: 379 AGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 681 AGG F ++ FP DYPF+PP + F T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y++D+ ++ AR + +++A Sbjct: 52 AGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = -3 Query: 376 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 678 GG F + +YP PKV F TK++HPN++ I LDILK++WSPAL I VLLSI +LL PNPDDPL ++ +K+++A+ TAR+WT+ YAM Sbjct: 50 GGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = -3 Query: 391 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 678 GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY +K +Y E +SWT Sbjct: 50 GGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.036e-22 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -3 Query: 379 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 675 GVF + +H P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 49 GVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 415 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 678 GG F +T+HF DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P E A ++ +K +Y Sbjct: 50 GGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREY 137
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = -3 Query: 379 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 675 GVF + + P YPF+PP++ F T ++HPNI+S G ICLD+LK W P+L I+ VL SI L+++PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 49 GVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 53 GGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CN185254 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = -3 Query: 379 GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 678 GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 53 GGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 The following BLAST results are available for this feature:
BLAST of CN185254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185254 ID=CN185254; Name=CN185254; organism=Citrus sinensis; type=EST; length=683bpback to top |