CN185246

Overview
NameCN185246
Unique NameCN185246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AK L F +D  A + +Q GV+KLAD V VTLGPKGRNVVL+ K+G+P I NDGV++A+E+ELEDP EN+GA+LV++ A KTND+AGDGTTT+ +LAQ +I EG+K V AGANP+LI  GI       V E+K++SK VE  E +A VAA+SA +  E+G +IA+AM KVG +GV+T+EE KS    L VVEGMQF
Sbjct:    2 AKMLKFGED--ARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVEGKEDIARVAAISAADE-EIGKLIADAMEKVGNEGVITIEESKSMGTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACHK (60 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACCZ (60 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACCR (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 115/195 (58.97%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACCE (60 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 115/195 (58.97%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACC7 (60 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 115/195 (58.97%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACC3 (60 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
[Close]
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACC2 (60 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.710e-54
Identity = 115/195 (58.97%), Postives = 146/195 (74.87%), Query Frame = 3 
Query:  270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK +E  S +A VAA+SA +  EVG +IAEAM +VG  GV+TLEE K     L VVEGMQF
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIEGKSSIAQVAAISAADE-EVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQF 193
The following BLAST results are available for this feature:
BLAST of CN185246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CLOBA1.710e-5458.4660 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_BACHK1.710e-5459.4960 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH60_BACCZ1.710e-5459.4960 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH60_BACCR1.710e-5458.9760 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH60_BACCQ1.710e-5459.4960 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH60_BACCE1.710e-5458.9760 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 ... [more]
CH60_BACC71.710e-5459.4960 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]
CH60_BACC41.710e-5458.9760 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH60_BACC31.710e-5459.4960 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH60_BACC21.710e-5458.9760 kDa chaperonin OS=Bacillus cereus (strain G9842... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001A17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001A17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185246 ID=CN185246; Name=CN185246; organism=Citrus sinensis; type=EST; length=851bp
CTCCTCTCTGCCTGCAGCTCCCCTTATCTCTTTAAACCCTAAAACTCTCG
CACTTTCTGCCGTCTCACAGTTTAAACGAATAAATGGCGTCGACTTTCAC
TGCCATGTCTTCCATTAGCTCCATGATTGCTCCTAATGGACGAATGACTG
ATAAGAAGCTTGCATCTTCTTCGAACAAATTGTCATCACTTGCTTCCATT
TCTTCAAGTTCATTCGGCAGGAGACAGAGTGTAGCTCTACGCAGGGCCCG
CACACCTAAGATTTATGCGGCAAAGGACTTGCATTTCAACAAGGATGGAT
ATGCCATGAAGAAACTTCAAAATGGTGTCAACAAGCTTGCAGATCTAGTT
GGAGTTACCCTTGGTCCCAAGGGCAGGAATGTTGTTCTAGAGAGCAAGTA
CGGTGCCCCAAAAATTGTGAATGATGGTGTAACTGTGGCCAAAGAAGTTG
AGTTAGAGGACCCGGTTGAGAACATTGGTGCTAAATTAGTGAGACAAGCA
GCTGCCAAGACTAATGACTTGGCTGGTGATGGAACAACAACATCTGTTGT
TCTTGCGCAAGGGCTTATAGCTGAAGGTGTTAAGGTCGTGGCAGCTGGTG
CAAATCCTGTTCTTATCACAAGAGGCATTGAGAAGACATCTAAGGCTCTT
GTTTCTGAGCTCAAGCAGATGTCAAAAGAGGTTGAAGATAGTGAACTTGC
CGATGTAGCAGCTGTTAGTGCAGGGAACAACTATGAAGTTGGGAATATGA
TTGCAGAAGCCATGAGTAAAGTGGGACGTAAGGGTGTGGTGACCCTTGAA
GAGGGAAAAAGTGCTGAGAATATGCTCTATGTTGTTGAGGGAATGCAATT
T
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