CN185246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 108/195 (55.38%), Postives = 150/195 (76.92%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AK + + ++ A + L+ GVN +AD V VTLGP+GRNVVL+ KYG+P + NDGVT+A+E+ELEDP EN GA+L+++AA KTND+AGDGTTT+ +LAQ ++ EG+K +AAGANP+L+ RGI K A V LK++SK +++ E +A VA++SA + E+G +IAEAM KVG+ GV+T+EE K+ L VVEGMQF Sbjct: 2 AKQIKYGEE--ARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEAATKTNDIAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAADE-EIGKLIAEAMDKVGKDGVITVEESKTLGTTLEVVEGMQF 193
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 106/196 (54.08%), Postives = 153/196 (78.06%), Query Frame = 3 Query: 267 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AAK++HF+ A +L GV KLAD V VT+GP+GRNV+++ +G+P I DGV+VAKE+EL + VEN+GA+LV++ A+KT D AGDGTTT+ VLA + EG++ + AGANP+ + RG++K ++A+V+ELK+++KEV+D E+A VA +SA N+ ++G +IAEAM KVG+ GV+T+EEGKS ++ L VVEGMQF Sbjct: 2 AAKEIHFSD--IARGELFEGVKKLADAVKVTMGPRGRNVLIQKSFGSPSITKDGVSVAKEIELPNTVENMGAQLVKEVASKTADEAGDGTTTATVLAYNIFKEGLRNITAGANPIEVKRGMDKAAEAIVAELKKIAKEVKDKKEIAQVATISANNDPKIGELIAEAMEKVGKDGVITVEEGKSLQDELEVVEGMQF 195
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_METPB (60 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 111/196 (56.63%), Postives = 145/196 (73.98%), Query Frame = 3 Query: 267 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AAKD+ F+ D A K+ GV+ LAD V VTLGPKGRNVV+E +GAP+I DGVTVAKE+EL D EN+GA++VR+ A+KTND+AGDGTTT+ VLAQ ++ EG K VAAG NP+ + RGI+ ++A V ++ +K+V S E+A V +SA + E+G MIA AM KVG +GV+T+EE K+AE L VVEGMQF Sbjct: 2 AAKDVRFSAD--ARDKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELADKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKFVAAGINPMDLKRGIDLATQAAVKDITARAKKVASSEEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEAKTAETELDVVEGMQF 195
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 107/196 (54.59%), Postives = 151/196 (77.04%), Query Frame = 3 Query: 267 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 +AK++ FN++G + GVN LAD V VTLGPKGRNV++E +G+P I DGV+VAKEVELE+ EN+GA+LV++ A+KT+D+AGDGTTT+ VLAQ + +G K+VAAG NP+ I RGI+K +A+V+EL+++SK ++D E+A V +SA N+ +G++IAEAM KVG++GV+T+EE K+ E L VEGMQF Sbjct: 2 SAKEIRFNEEG--RNAILRGVNALADAVKVTLGPKGRNVIIEKSFGSPLITKDGVSVAKEVELENKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYKQGSKLVAAGHNPMEIKRGIDKAVEAIVAELQKISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAMETSLETVEGMQF 195
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 110/195 (56.41%), Postives = 148/195 (75.90%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AK++ F ++ A + L+ GVNKLAD V VTLGPKGRNV+++ K+G+P I NDGVT+A+E+ELED EN+GA+LV++ A KTND+AGDGTTT+ +LAQ +I EG+K VAAGANP+++ +GI+K V ELK S++VE E +A + AVSA + E+G +IA+AM KVG GV+T+EE KS L VVEGMQF Sbjct: 2 AKEIKFAEE--ARRSLEAGVNKLADTVKVTLGPKGRNVIIDKKFGSPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMILKKGIQKAVDVAVEELKNTSQKVEGKEAIAQIGAVSAADE-EIGQLIADAMEKVGNDGVITVEESKSMGTTLDVVEGMQF 193
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH602_PROM3 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL2 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 110/194 (56.70%), Postives = 142/194 (73.20%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AK L F+ D + L+ GVN LAD V VT+GP+GRNVVLE K+GAP IVNDGVT+AKE+EL+DP EN+GAKL++Q A+KT D AGDGTTT+ VLAQ ++ EG++ VAAGA+P+ + RG+EK LV EL Q+S+ V + + VA VS+G + EVG M++EAM KV GV+T+EE KS L V EGM F Sbjct: 2 AKLLSFSDD--SRSALERGVNSLADAVRVTIGPRGRNVVLEKKFGAPDIVNDGVTIAKEIELDDPFENLGAKLIQQVASKTKDKAGDGTTTATVLAQAMVHEGLRNVAAGASPIELRRGMEKAVAQLVEELAQLSQAVGGNAIHQVATVSSGGDQEVGRMVSEAMDKVSADGVITVEESKSLATELEVTEGMAF 193
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_OENOB (60 kDa chaperonin OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=groL PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.918e-54 Identity = 113/195 (57.95%), Postives = 144/195 (73.85%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AK++ F++D A ++Q G++KLAD V T+GPKGRNVVLE YG P I NDGVT+AK VEL+D EN+GAKLV +AA+KTND+AGDGTTT+ VL Q ++ EG+K V AGANPV I GIEK + A V+ L + S EVED S + +A++SA N E+G +IA+AM KVG GV+T+EE K E L VVEGMQF Sbjct: 2 AKEVRFSED--ARTRMQAGIDKLADAVKTTIGPKGRNVVLEQSYGTPTITNDGVTIAKAVELDDHYENMGAKLVTEAASKTNDVAGDGTTTATVLTQAIVNEGLKNVTAGANPVGIRSGIEKATAAAVAGLNKNSHEVEDSSSIQQIASISAANE-EIGKLIADAMEKVGHDGVITIEESKGIETELDVVEGMQF 193
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.918e-54 Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AKD+ F+++ A + + GV+ LAD V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANPV + +GIE+ V LK++SK +E E +A VA++SA + EVG++IAEAM +VG GV+T+EE K L VVEGMQF Sbjct: 2 AKDIKFSEE--ARRSMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGIEQAVAVAVESLKEISKPIEGKESIAQVASISAADE-EVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQF 193
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.811e-54 Identity = 110/196 (56.12%), Postives = 147/196 (75.00%), Query Frame = 3 Query: 267 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSE-LADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AAKD+ F D A K+ GVN LAD V VTLGPKGRNVVL+ +GAP I DGV+VA+E+ELED +N+GA++V++ A+K ND AGDGTTT+ VLAQ ++ EG+K VAAG NP+ + RGI+K A V +LK++S E D++ +A V +SA ++ VGN+IAEAM KVGR GV+T+EEG++ ++ L VVEGMQF Sbjct: 2 AAKDVKFGND--ARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEQLKELSVECNDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQF 195
BLAST of CN185246 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.811e-54 Identity = 107/195 (54.87%), Postives = 149/195 (76.41%), Query Frame = 3 Query: 270 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQF 851 AK + +N+ A + L+ G++ L + V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G L+RQAA+KTND AGDGTTT+ VLA ++ G++ VAAGAN + + RGI++ + LVS++++ +K + D + +A V A+SAGN+ EVG MIA+AM KVG++GV++LEEGKS L V EGM+F Sbjct: 2 AKRIIYNEQ--ARRALEKGIDILTESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKRGIDQAAVFLVSKIEENAKPITDNNSIAQVGAISAGNDDEVGKMIADAMEKVGKEGVISLEEGKSMTTELEVTEGMRF 194 The following BLAST results are available for this feature:
BLAST of CN185246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185246 ID=CN185246; Name=CN185246; organism=Citrus sinensis; type=EST; length=851bpback to top |