EY666534

Overview
NameEY666534
Unique NameEY666534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.982e-39
Identity = 87/241 (36.10%), Postives = 138/241 (57.26%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            + +W++S P + +    W +L    +K++  +   +FNIP+L+VGT            K ++FVE    K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ SE+L+TLL VVPK +  DW+  YETL+  VVPR+S +L ED +  L    LF +  ++F    R
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEYETLSEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKAR 242          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC_MANSE (V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.110e-38
Identity = 93/246 (37.80%), Postives = 140/246 (56.91%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGRGERGF 752
            S YW++S P   +    W  L +    ++     Y+F IP+L+VGT            K ++FVE V+ K+ + + E LE        +L+ +   +  YLTRF WD AKYP    LR I D I   V +I+ DLKV+ + YN ++  L  + +KQ+GSL  R+L+DLVK E  I+ SE+L TLL +VPK    DW A+YE +T  +VPR+++L+ +D +  L+T  LF +V + F++  R ER F
Sbjct:    2 SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLPHYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIHQDGDYGLFTVTLFKKVVDEFKLHAR-ERKF 245          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.110e-38
Identity = 88/268 (32.84%), Postives = 158/268 (58.96%), Query Frame = 3
Query:   27 YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPEDIITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGRGERGFPNCGDLKVKGGEPRTGRARARERKYN 830
            +W++S P     A +++++ ++ +K +  +   +FN P LRVGT            K ++ VES + KI RQ+ +L      +  SLS++G  +  YL +F WD+AKY     L+EIV+ I + V+KI+DDLK++ +EY+ + S + +  RK SG+L VR L+DL+  ++I+ +++  T   V+PK S+K+++A YET++ +V+ R++K + +DN+  LY+  LF +   NF+     ++      D K++  +P   R++  E K N
Sbjct:    7 FWLISAP-NLPGADIFDQVNQKTAKENSLSENKKFNTPALRVGTLNSLITLNDELQKIDTIVESTTKKIARQLVDLVGTKPGKDKSLSINGHTIPQYLQQFAWDDAKYNLKLSLQEIVEKISSAVSKIDDDLKIKSSEYSTLSSSVASEERKASGNLQVRTLNDLITADNIVQTDYFTTAFVVIPKQSEKEFLACYETISDFVLGRSAKRVAQDNDYFLYSVILFKKFYENFKTKIIEKKWVVR--DFKLEDNKPTQERSKLTEDKKN 271          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.218e-38
Identity = 87/241 (36.10%), Postives = 140/241 (58.09%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            + +W++S P   +    W+++    ++ +  +   +FNIP L+VGT            K ++FVESV  KI + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + +   V +I++DLK R + YN+++  L ++ RK  GSL  R L+D+VK ED ++ SE+L TLL +V K +  +W  +YETL+  VVPR++KLL ED E  L++  LF +  ++F+   R
Sbjct:    2 TEFWLISAPGDKTCQQTWDKMNMATAESNNLSTNNKFNIPELKVGTLDVLVGLSDELAKLDTFVESVVKKIAQYMTDVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKSISEIMSKQVTQIDNDLKARASAYNSLKGSLQSLERKNVGSLLTRSLADIVKKEDFVLDSEYLTTLLVIVSKTNYPEWQKTYETLSEMVVPRSTKLLFEDQESGLFSVTLFTKAIDDFKQQAR 242          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC_CAEEL (V-type proton ATPase subunit C OS=Caenorhabditis elegans GN=vha-11 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.357e-36
Identity = 86/242 (35.54%), Postives = 141/242 (58.26%), Query Frame = 3
Query:   18 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            +  YW++S+P +  A   W++L       S ++   ++ IP+L+VGT            K ++  E+V  K+ +   E LE      + +L +    + TY+T+F W+ AKYP    L+ + + I   +++I++DLKV+   YNN+++ L +++RK  GSL  +DL+DLVK +D ++ SE+L T++ VVPK S K+W   Y TL+S VVP +SKLL E+ E  LYT  LF +V + F+   R
Sbjct:    6 SGEYWLISVPGEKGANDAWDKLNRSTGNTSTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQTVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLFKKVIDEFKNTAR 244          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC2_RAT (V-type proton ATPase subunit C 2 OS=Rattus norvegicus GN=Atp6v1c2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.314e-36
Identity = 85/241 (35.27%), Postives = 137/241 (56.85%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            S +W++S P          R+    SK +      +F IP+ +VGT            K ++F ES+  ++ + + E +E   G    +L  +GV + +++T F WD AKYP   PL  +VD +   +A+IE DLK R A Y+ +++ L  + +K +G+L  R LSD+V  ED ++ SE+L+TLL +VPK S   W  +YE+L+  VVPR++KL+ EDNE  L+T  LF +V  +F++  +
Sbjct:    2 SEFWLISAPGDKENLQALERMNSVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKVHENLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKKSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSYVQWQKTYESLSDMVVPRSTKLIAEDNEGGLFTVTLFRKVIEDFKVKAK 241          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC2_MOUSE (V-type proton ATPase subunit C 2 OS=Mus musculus GN=Atp6v1c2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.156e-36
Identity = 84/241 (34.85%), Postives = 137/241 (56.85%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            S +W++S P          R+    SK +      +F IP+ +VGT            K ++F ES+  ++ + + E +E   G    +L  +GV + +++T F WD AKYP   PL  +VD +   +A+IE DLK R A Y+ +++ L  + ++ +G+L  R LSD+V  ED ++ SE+L+TLL +VPK S   W  +YE+L+  VVPR++KL+ EDNE  L+T  LF +V  +F++  +
Sbjct:    2 SEFWLISAPGDKENLQALERMNNVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKAHETLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKRSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSFAQWQKTYESLSDMVVPRSTKLIAEDNEGGLFTVTLFRKVIEDFKVKAK 241          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC2_HUMAN (V-type proton ATPase subunit C 2 OS=Homo sapiens GN=ATP6V1C2 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.156e-36
Identity = 88/239 (36.82%), Postives = 135/239 (56.49%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKH--SFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFE 725
            S +W++S P          R+    SK   S++T   +F IP+ +VGT            K ++F ES+  ++ + + E +E   G     L  +GV + +++T F WD AKYP   PL  +VD I   +A+IE DLK R A YN +++ L  + +K  G+L  R LSD+V  ED ++ SE+LVTLL +VPK +   W  +YE+L+  VVPR++KL+ ED E  L+T  LF +V  +F+
Sbjct:    2 SEFWLISAPGDKENLQALERMNTVTSKSNLSYNT---KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFK 237          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC_CAEBR (V-type proton ATPase subunit C OS=Caenorhabditis briggsae GN=vha-11 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 85/242 (35.12%), Postives = 139/242 (57.44%), Query Frame = 3
Query:   18 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPED-IITSEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFEIAGR 737
            +  YW++S+P +  A   W++L       S ++   ++ IP+L+VGT            K ++  E V  K+ +   E LE      + +L +    + TY+T+F W+ AKYP    L+ + + I   + +I++DLK++   YNN+++ L +++RK +GSL  +DL+DLVK ED ++ SE+L T++ VVPK   K+W   Y TL+S VVP +SKLL E+ E  LYT  LF +V + F+   R
Sbjct:    7 SGEYWLISVPGEKGANDAWDKLNRATGNISTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEGVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQITQIDNDLKMKSLAYNNLKNALASMDRKTTGSLLTKDLADLVKAEDFVLNSEYLQTIIVVVPKILVKEWETKYATLSSMVVPGSSKLLTEEGEHALYTVTLFKKVIDEFKNIAR 245          
BLAST of EY666534 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.705e-32
Identity = 79/238 (33.19%), Postives = 132/238 (55.46%), Query Frame = 3
Query:   21 SRYWVVSLPVQNSAASVWNRLQEQISKHSFD-TPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSDLVKPEDIIT-SEHLVTLLAVVPKYSQKDWVASYETLTSYVVPRASKLLDEDNE*CLYTGALFGRVANNFE 725
            S +WV+S P   +    + RLQ+       + +  Y+F+IP L+VGT            K ++F E V  K+   + E LE      SS+LS     +  ++ RF W+ AKYPT  P++ + + +  +V +++ DL+ +   YNN++S L  + RK +GSL +R+LS +VK +D I  SE+L T++  VP     +W  +YE+L  YV P++S+LL +D E  L+  ++F +V   F+
Sbjct:    2 SEFWVISAPGDKTPQQTYERLQKATMGSGQNLSNCYKFSIPELKVGTLDSLIGLTDDLGKLDTFCEGVCRKVASYMGEVLEDQKDKLSSNLSAGEGTLVNFMHRFQWNMAKYPTKQPIKSLTEILSKVVTQVDTDLRSKSQAYNNLKSSLQNMERKATGSLLLRNLSQIVKKDDFIDGSEYLRTVIVAVPVALFGEWEKNYESLADYVAPKSSRLLTQDEEYGLFATSIFKKVYEEFK 239          
The following BLAST results are available for this feature:
BLAST of EY666534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
VATC1_XENLA4.982e-3936.10V-type proton ATPase subunit C 1 OS=Xenopus laevis... [more]
VATC_MANSE1.110e-3837.80V-type proton ATPase subunit C OS=Manduca sexta PE... [more]
VATC_DICDI1.110e-3832.84V-type proton ATPase subunit C OS=Dictyostelium di... [more]
VTC1B_DANRE4.218e-3836.10V-type proton ATPase subunit C 1-B OS=Danio rerio ... [more]
VATC_CAEEL1.357e-3635.54V-type proton ATPase subunit C OS=Caenorhabditis e... [more]
VATC2_RAT2.314e-3635.27V-type proton ATPase subunit C 2 OS=Rattus norvegi... [more]
VATC2_MOUSE5.156e-3634.85V-type proton ATPase subunit C 2 OS=Mus musculus G... [more]
VATC2_HUMAN5.156e-3636.82V-type proton ATPase subunit C 2 OS=Homo sapiens G... [more]
VATC_CAEBR6.734e-3635.12V-type proton ATPase subunit C OS=Caenorhabditis b... [more]
VATC_ASCSS7.705e-3233.19V-type proton ATPase subunit C 2 OS=Ascidia sydnei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666534 ID=EY666534; Name=EY666534; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGGAAATGGCATCAAGGTACTGGGTGGTGTCTCTTCCAGTA
CAAAATTCAGCCGCTTCTGTTTGGAATCGATTACAGGAACAAATCTCTAA
ACATTCATTTGACACTCCTCTTTACAGGTTTAATATCCCCAACCTCCGTG
TTGGAACCCTAGATTCACTCCTTGCACTTAGCGATGATCTCGTGAAGTCA
AATAGCTTTGTTGAATCAGTATCTCACAAGATCAGGCGACAGATTGAGGA
ACTGGAGAGGGTATCAGGCATAGAGAGTAGTTCTTTGAGTGTTGATGGAG
TACCAGTTGATACTTATCTCACTAGGTTTGTTTGGGATGAAGCAAAGTAC
CCAACTATGTCACCTTTAAGGGAAATTGTGGATGGCATTCATACTCTTGT
GGCAAAGATTGAAGACGATCTTAAGGTTCGTGTTGCTGAGTATAATAATG
TCCGCAGTCAGCTGAATGCTATTAATCGAAAGCAAAGTGGAAGCTTAGCT
GTTCGTGATCTTTCCGATCTGGTAAAACCAGAGGATATCATTACCTCAGA
ACATCTTGTAACCCTTCTTGCTGTTGTCCCCAAGTACTCCCAGAAAGATT
GGGTGGCTAGCTATGAGACGTTGACTAGCTATGTGGTCCCCAGGGCCTCC
AAGCTATTGGATGAGGATAATGAATAATGCCTTTACACTGGCGCACTATT
TGGACGGGTTGCAAACAATTTCGAAATAGCTGGCCGTGGAGAAAGGGGGT
TCCCAAATTGTGGGGATTTGAAAGTGAAGGGCGGAGAGCCAAGGACAGGG
CGAGCACGGGCGCGGGAGAGAAAATATAACTACGAAGGAAAAGAGATAGA
TAAAAGTCTGTGTGTGAGGAGTGGAGACGGGTGAAGGGGGCGGGGACGTA
GCG
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