DC887747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_CHAGB (Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34 Identity = 78/124 (62.90%), Postives = 88/124 (70.97%), Query Frame = -3 Query: 186 TKGGR--GKPKSTKSI-SRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGK 548 T GG+ GK +K+ SRS KAGL FPVGR+ R L+ G YA RVGAGAP AGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+K GK Sbjct: 2 TGGGKSGGKASGSKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGK 125
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34 Identity = 80/132 (60.61%), Postives = 92/132 (69.70%), Query Frame = -3 Query: 153 GGRGKPKSTK--SISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 542 GG+GK S++ S SRS KAGL FPVGR+ R L+ G YA RVG+GAP AGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K K G ASQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAKKAKP----GKASQE 130
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_USTMA (Histone H2A OS=Ustilago maydis GN=HTA1 PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 6.025e-34 Identity = 77/132 (58.33%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 165 SAGSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGS 560 S+G GG+ S+K+ SRS KAGLQFPVGRI R L+ G YA RVGAGAP AGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTI+ GGVLP I LLP K GK ++ GS Sbjct: 2 SSGGKSGGKAGDASSKAQSRSAKAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVLPFIQSELLPAKSGKPKKAGGS 133
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 6.025e-34 Identity = 76/131 (58.02%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 153 KGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 545 KGG+ + S SRS KAGL FPVGR+ R L+ G YA R+G+GAP AGNAARDNKK RI+PRH+QLA+RND+EL+KLLG VTIA GGVLPNIHQNLLP+K K + ASQE Sbjct: 5 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKATK----ASQE 131
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A2_YEAST (Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 7.869e-34 Identity = 76/131 (58.02%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 153 KGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 545 KGG+ + S SRS KAGL FPVGR+ R L+ G YA R+G+GAP AGNAARDNKK RI+PRH+QLA+RND+EL+KLLG VTIA GGVLPNIHQNLLP+K K ASQE Sbjct: 5 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK----TAKASQE 131
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 7.869e-34 Identity = 76/131 (58.02%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 153 KGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 545 KGG+ + S +RS KAGL FPVGR+ R L+ G YA R+G+GAP AGNAARDNKK+RI+PRH+QLA+RND+EL+KLLG VTIA GGVLPNIHQNLLP+K K SASQE Sbjct: 5 KGGKAGSAAKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK-----PSASQE 130
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33 Identity = 78/123 (63.41%), Postives = 87/123 (70.73%), Query Frame = -3 Query: 189 TKGGR--GKPKSTKSI-SRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMG 548 T GG+ GK S K+ SRS KAGL FPVGR+ R L+ G YA RVGAGAP AGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+K G Sbjct: 2 TGGGKSGGKASSGKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTG 124
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4) HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33 Identity = 76/121 (62.81%), Postives = 85/121 (70.25%), Query Frame = -3 Query: 186 KGGRGKPKSTKSI-SRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGK 545 K GK +TK+ SRS KAGL FPVGR+ R L+ G YA RVGAGAP AGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+K K Sbjct: 5 KSAGGKAGTTKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAK 125
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33 Identity = 80/138 (57.97%), Postives = 92/138 (66.67%), Query Frame = -3 Query: 153 AGSTKGGRGKPKS---TKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 557 +G K G+ K+ TKS+SRS KAGLQFPVGR+ R LK G YA RVGAGAP AGNAARDNKK RIVPRH+QLA+RNDEEL KLLG V I+ GGV+P+I LLP K KG++D G SQE Sbjct: 2 SGKGKAGKSGGKAGSETKSMSRSSKAGLQFPVGRVHRLLKKGNYAQRVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEELHKLLGNVVISQGGVVPHIAPELLPSKSSKGKKDEG-VSQE 138
BLAST of DC887747 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.342e-33 Identity = 77/131 (58.78%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 171 GSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPR---KMGKGREDI 554 G GG+ S + SRS KAGL FPVGR+ R L+ G YA RVGAGAP AGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+ K GKG +++ Sbjct: 3 GGKSGGKASG-SKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAGKGSQEL 132 The following BLAST results are available for this feature:
BLAST of DC887747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887747 ID=DC887747; Name=DC887747; organism=Citrus sinensis; type=EST; length=565bpback to top |