EY666533

Overview
NameEY666533
Unique NameEY666533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+++LP  +F Y   GA  + TL+ N +  + +  R R+L D+S++D S  + G K+SMP+ ++P  +  M    GE          G   T+SS S   +EEVA       + +LY  KDR
Sbjct:    3 ISSSTDYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+ +LP  +F Y   GA  + TL+ N    S +  R R+L  V ++D+STT+L  ++SMP+ +AP  +  M    GE          G   TLS+ S   +EEV S      + +LY  KDR
Sbjct:    3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     + +LY  KDR
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     + +LY  KDR
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
The following BLAST results are available for this feature:
BLAST of EY666533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
LLDD_ESCF31.794e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ALCFA1.794e-1231.82L-lactate dehydrogenase [cytochrome] OS=Alcaligene... [more]
LLDD_CITK82.343e-1232.58L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_XANP23.060e-1233.33L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_VIBCM3.060e-1233.07L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH3.060e-1233.07L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_SHISS3.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL3.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF83.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS3.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666533 ID=EY666533; Name=EY666533; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGGGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTGCGGCTCTATGGGTACAAGGACAGGGAA
TGGGGGTGCGTCACCTTGTGGGCAAGGGCCTGAAAGAAGCCGGAACCAAA
GGCCATTGCGTCAGAAAAACGGAAGCCCCGAAGGATGAGTCGGCAGAAGA
AACCGGAGCGTGCTCGCAGGATTCGGGTCTAACACGAGTGTTGAAGATTA
AGAGAGTTTCCGGGATTTGGGACGATGGGCAAGAGCGACGGAGGGAGAGC
GGCGTGACGGGAGAGAGCGCGCAGGGCGAGGCGGGTCGGTGAGGGGGGTG
AGAAGGGCGGAGGAGGGGCGGCGGGGGTGAGCCGAGAGCGCGCCGAGGGC
GGCGCGGGCGCGCCGACGACTACCACACTCAGCCAGGGAGGCGAGGATGG
GGATA
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