EY666533

Overview
NameEY666533
Unique NameEY666533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO8A (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O8 (strain IAI1) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO5E (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +Y A A+ KLP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T++ G K++MP+++ P  +  M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDR 134          
The following BLAST results are available for this feature:
BLAST of EY666533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
LLDD_ECO8A3.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO5E3.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO573.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO553.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO243.997e-1232.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SERP55.220e-1233.07L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_SALTY5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666533 ID=EY666533; Name=EY666533; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGGGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTGCGGCTCTATGGGTACAAGGACAGGGAA
TGGGGGTGCGTCACCTTGTGGGCAAGGGCCTGAAAGAAGCCGGAACCAAA
GGCCATTGCGTCAGAAAAACGGAAGCCCCGAAGGATGAGTCGGCAGAAGA
AACCGGAGCGTGCTCGCAGGATTCGGGTCTAACACGAGTGTTGAAGATTA
AGAGAGTTTCCGGGATTTGGGACGATGGGCAAGAGCGACGGAGGGAGAGC
GGCGTGACGGGAGAGAGCGCGCAGGGCGAGGCGGGTCGGTGAGGGGGGTG
AGAAGGGCGGAGGAGGGGCGGCGGGGGTGAGCCGAGAGCGCGCCGAGGGC
GGCGCGGGCGCGCCGACGACTACCACACTCAGCCAGGGAGGCGAGGATGG
GGATA
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