EY666533

Overview
NameEY666533
Unique NameEY666533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALPA (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALA4 (L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain SL483) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134
[Close]
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 2 
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +++  ++   A+ +LP+ +FDY   GA  + T+  N +  + I  R R+L+DVS +D STT+ G + ++P+ +AP  +  M    GE          G    LS+ S   V+EV +      + +LY  +DR
Sbjct:    3 VSSTTDFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDR 134
The following BLAST results are available for this feature:
BLAST of EY666533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
LLDD_SALPC5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPB5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPA5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALHS5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALG25.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALEP5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALDC5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALAR5.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALA45.220e-1231.82L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_CAUCR5.220e-1229.55L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666533 ID=EY666533; Name=EY666533; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGGGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTGCGGCTCTATGGGTACAAGGACAGGGAA
TGGGGGTGCGTCACCTTGTGGGCAAGGGCCTGAAAGAAGCCGGAACCAAA
GGCCATTGCGTCAGAAAAACGGAAGCCCCGAAGGATGAGTCGGCAGAAGA
AACCGGAGCGTGCTCGCAGGATTCGGGTCTAACACGAGTGTTGAAGATTA
AGAGAGTTTCCGGGATTTGGGACGATGGGCAAGAGCGACGGAGGGAGAGC
GGCGTGACGGGAGAGAGCGCGCAGGGCGAGGCGGGTCGGTGAGGGGGGTG
AGAAGGGCGGAGGAGGGGCGGCGGGGGTGAGCCGAGAGCGCGCCGAGGGC
GGCGCGGGCGCGCCGACGACTACCACACTCAGCCAGGGAGGCGAGGATGG
GGATA
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