EY666533

Overview
NameEY666533
Unique NameEY666533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +++  ++   A+ +LP+ +FDY   GA  + T+  N +  + I  R R+L+DVS +D STT+ G + ++P+ +AP  +  M    GE          G    LS+ S   V+EV +      + +LY  +DR
Sbjct:    3 VSSTTDFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +Y A A+ +LP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T + G K++MP+++AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECOK1 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 / APEC GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y A A+ +LP  +F Y   GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  +DR
Sbjct:    3 ISSGNDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDR 134          
The following BLAST results are available for this feature:
BLAST of EY666533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
LLDD_CAUCN5.220e-1229.55L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_ERWCT6.818e-1233.07L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_ECOUT1.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL61.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL51.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOK11.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO811.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I1.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO451.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ACIBY1.163e-1131.82L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666533 ID=EY666533; Name=EY666533; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGGGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTGCGGCTCTATGGGTACAAGGACAGGGAA
TGGGGGTGCGTCACCTTGTGGGCAAGGGCCTGAAAGAAGCCGGAACCAAA
GGCCATTGCGTCAGAAAAACGGAAGCCCCGAAGGATGAGTCGGCAGAAGA
AACCGGAGCGTGCTCGCAGGATTCGGGTCTAACACGAGTGTTGAAGATTA
AGAGAGTTTCCGGGATTTGGGACGATGGGCAAGAGCGACGGAGGGAGAGC
GGCGTGACGGGAGAGAGCGCGCAGGGCGAGGCGGGTCGGTGAGGGGGGTG
AGAAGGGCGGAGGAGGGGCGGCGGGGGTGAGCCGAGAGCGCGCCGAGGGC
GGCGCGGGCGCGCCGACGACTACCACACTCAGCCAGGGAGGCGAGGATGG
GGATA
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