EY666533

Overview
NameEY666533
Unique NameEY666533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + I  R R+L ++S + +ST + G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISAASDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + I  R R+L ++S + +ST + G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISAASDYRAAAEARLPPFLFHYMDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_XANC8 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + I  R R+L ++S + +ST + G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISAASDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    + MP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLPMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 38/132 (28.79%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+ +LP  +F Y   GA  + T++ N +  + +  R R+L  V  +D+STT+   +++MP+++AP  +  M    GE          G  +TLS+ S   +EEV +      + +LY  +DR
Sbjct:    3 ISSSTDYREAARRRLPPFLFHYIDGGAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_SALNS (L-lactate dehydrogenase [cytochrome] OS=Salmonella newport (strain SL254) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + T +    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     + +LY  +DR
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETPLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 2
Query:  167 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            +Y A A+ KLP  +F Y   GA  + TL+ N +  + I  R R+L ++S++ +ST +    +SMP+ +AP  +  M    GE          G   T+S+ S   +EEVA       + +LY  KDR
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIN (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae GN=lldD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+ ++P  +F Y   G+  + TL  N +    I  R R+L D+S++D S  + G K+SMP ++AP     M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISSASDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+ ++P  +F Y   G+  + TL  N +    I  R R+L D+S++D S  + G K+SMP ++AP     M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISSASDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDR 134          
BLAST of EY666533 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  152 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSRVEEVASTGPGIRFLRLYGYKDR 547
            I++  +Y   A+ ++P  +F Y   G+  + TL  N +    I  R R+L D+S++D S  + G K+SMP ++AP     M    GE          G   TLS+ S   +EEVA       + +LY  KDR
Sbjct:    3 ISSASDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDR 134          
The following BLAST results are available for this feature:
BLAST of EY666533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
LLDD_XANCP1.984e-1131.82L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANCB1.984e-1131.82L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANC81.984e-1131.82L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_SALCH1.984e-1131.06L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_AGRVS1.984e-1128.79L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_SALNS2.591e-1131.06L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_PSEPG3.384e-1132.28L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_HAEIN3.384e-1131.82L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIG3.384e-1131.82L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE3.384e-1131.82L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666533 ID=EY666533; Name=EY666533; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGGGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTGCGGCTCTATGGGTACAAGGACAGGGAA
TGGGGGTGCGTCACCTTGTGGGCAAGGGCCTGAAAGAAGCCGGAACCAAA
GGCCATTGCGTCAGAAAAACGGAAGCCCCGAAGGATGAGTCGGCAGAAGA
AACCGGAGCGTGCTCGCAGGATTCGGGTCTAACACGAGTGTTGAAGATTA
AGAGAGTTTCCGGGATTTGGGACGATGGGCAAGAGCGACGGAGGGAGAGC
GGCGTGACGGGAGAGAGCGCGCAGGGCGAGGCGGGTCGGTGAGGGGGGTG
AGAAGGGCGGAGGAGGGGCGGCGGGGGTGAGCCGAGAGCGCGCCGAGGGC
GGCGCGGGCGCGCCGACGACTACCACACTCAGCCAGGGAGGCGAGGATGG
GGATA
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