DC887740

Overview
NameDC887740
Unique NameDC887740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30
Identity = 70/137 (51.09%), Postives = 90/137 (65.69%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIG+ EP S+ ++++ TGKI +K ++ +V+  FD RP  +   LDL R     +L TA YGHFGR+  +F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMIETFRTGKISNKSLINLVRNIFDLRPYGLIEMLDLLR---PIYLNTAVYGHFGRE--EFPWE 369          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30
Identity = 68/137 (49.64%), Postives = 93/137 (67.88%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AK+IVA  LA  C VQ++YAIGV +P+S+ ++++G+GK  +++++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  252 GDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAELADSCEVQLAYAIGVAQPVSISINTFGSGKASEEKLIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRHDVDLPWE 385          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 67/139 (48.20%), Postives = 94/139 (67.63%), Query Frame = -2
Query:  386 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY +R  AK+IVA+GLA RC +Q+SYAIGV  P+S+F++++GT KI +K+++ ++ E+FD RP  + + LDL +     + +TA YGHF +    F WE +
Sbjct:  238 GDCGLTGRKIIVDTYGGMARHGGGSFSGKDPSKVDRSAAYALRYVAKNIVASGLADRCEIQISYAIGVSNPISIFIETFGTQKISNKKLINLIHENFDLRPHGLIVMLDLLK---PIYRETAVYGHFSK--IHFPWEKI 371          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_SYNSC (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9605) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 76/153 (49.67%), Postives = 94/153 (61.44%), Query Frame = -2
Query:  359 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMM-----TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 802
            GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK +VA GLA R  VQ+SYAIGV +P+S+ V+S+GT  + +  +  +V+E FD RPG +       NL  +RGG   +  TAAYGHFGR+D +  WE V     E  Q
Sbjct:  256 GDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKCLVAAGLAERAEVQLSYAIGVAKPVSILVESFGTSALANDALTALVQEHFDLRPGAIIETFGLRNLPQQRGG-CFYQDTAAYGHFGRNDLNAPWEDVTAKSQELKQ 407          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 72/137 (52.55%), Postives = 89/137 (64.96%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP +++  +V+E FD RP  +   +DL +     + +TAAYGHFGR+   F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTEQLTLLVREFFDLRPYGLIQMMDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GDAGLTGRKII+DTY            GKD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV +P+S+ ++++GT  +P+ ++++ V+++FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  247 GDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKVEVQLAYAIGVAQPVSISINTFGTSDLPESKLIEAVRKNFDLRPAGIIEMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 380          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.703e-30
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  238 GDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKLPTEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
The following BLAST results are available for this feature:
BLAST of DC887740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BUCAP2.070e-3051.09S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BACSU2.070e-3049.64S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_ACTPJ2.070e-3051.09S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP72.070e-3051.09S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_WIGBR2.703e-3048.20S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_SYNSC2.703e-3049.67S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SODGM2.703e-3052.55S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SERP52.703e-3052.55S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_ENTFA2.703e-3048.91S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_ENT382.703e-3052.55S-adenosylmethionine synthetase OS=Enterobacter sp... [more]

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Properties
Property NameValue
Genbank descriptionDC887740 EIC Citrus sinensis cDNA clone EIC0815 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887740 ID=DC887740; Name=DC887740; organism=Citrus sinensis; type=EST; length=806bp
GGCTTTAGCCAAAGTTACAAATTAATACAACTCGCTGCTGCCTTCATTCT
ACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAATTTTACTAATTCCAGG
CACCAGTTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGAC
ATGGTACATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGA
AAGGAATTGAATGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCT
TAGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTAC
CAATAGAAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAA
ATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGT
GAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGA
ACCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCT
GGCCTGAAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGG
AATCTTGCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCA
CACCAATGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTT
GCAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATC
CACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCC
AGCCACCATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCA
CCATGA
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