DC887740

Overview
NameDC887740
Unique NameDC887740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:976..1781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.297e-36
Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  239 GDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.297e-36
Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLAR+C +QVSYAIGV EP S+ VD++GT KIP+++I+++VK+ FD RP  +   LDL R   G   KTAAYGHFGR++P+F+WE
Sbjct:  242 GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGVAEPTSIAVDTFGTNKIPNEKIVELVKKHFDLRPKGIIQMLDLLRPIYG---KTAAYGHFGREEPEFSWE 375          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.297e-36
Identity = 78/137 (56.93%), Postives = 98/137 (71.53%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E FD RP  +   L+LKR     + +TAAYGHFGR+ PDFTWE
Sbjct:  239 GDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36
Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = -2
Query:  389 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE+
Sbjct:  239 GDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36
Identity = 83/146 (56.85%), Postives = 98/146 (67.12%), Query Frame = -2
Query:  365 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 802
            GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V  GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV ++FD RPGM+  NLDLKR     +  TA  GHFG +  DF WE  + LK +K
Sbjct:  245 GDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36
Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLAR+C VQV+YAIGV +P+S+ V ++GTGKIPD ++ +++   FD RP  +   LDL R   G   KTAAYGHFGR++P FTWE
Sbjct:  240 GDCGLTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMVQTFGTGKIPDGKLAELIARHFDLRPRAIIHELDLLRPIYG---KTAAYGHFGREEPSFTWE 373          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36
Identity = 77/138 (55.80%), Postives = 98/138 (71.01%), Query Frame = -2
Query:  392 HGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 805
            HGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC VQV+YAIGV  P+S+ ++++GTG+I D++I+++V+  FD RP  +   L+L R   G   KTAAYGHFGRD+P+FTWE
Sbjct:  240 HGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRWVAKNIVAAGLADRCEVQVAYAIGVARPVSMMIETFGTGRITDEKIVELVQRHFDLRPKAIIQELNLLRPIYG---KTAAYGHFGRDEPEFTWE 374          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.253e-35
Identity = 77/137 (56.20%), Postives = 97/137 (70.80%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLAR+C +QVSYAIG+ EP S+ VD++GT  IP+++I+++VK  FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  242 GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGIAEPTSISVDTFGTNAIPNEKIVELVKRHFDLRPKGIIQMLDLLR---PIYTKTAAYGHFGREEPEFTWE 375          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.253e-35
Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +    +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  239 GDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DC887740 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.253e-35
Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = -2
Query:  392 GDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 802
            GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+G+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V + FD RP  +   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  249 GDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
The following BLAST results are available for this feature:
BLAST of DC887740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_COXB13.297e-3656.20S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CHRVO3.297e-3657.66S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK_CELJU3.297e-3656.93S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]
METK_TERTT7.344e-3657.97S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK5_CAEEL7.344e-3656.85Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_NITEU9.592e-3656.20S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_AZOSE9.592e-3655.80S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_LARHH1.253e-3556.20S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_COXBN1.253e-3555.47S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CLOCE1.253e-3554.74S-adenosylmethionine synthetase OS=Clostridium cel... [more]

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Properties
Property NameValue
Genbank descriptionDC887740 EIC Citrus sinensis cDNA clone EIC0815 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887740 ID=DC887740; Name=DC887740; organism=Citrus sinensis; type=EST; length=806bp
GGCTTTAGCCAAAGTTACAAATTAATACAACTCGCTGCTGCCTTCATTCT
ACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAATTTTACTAATTCCAGG
CACCAGTTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGAC
ATGGTACATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGA
AAGGAATTGAATGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCT
TAGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTAC
CAATAGAAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAA
ATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGT
GAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGA
ACCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCT
GGCCTGAAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGG
AATCTTGCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCA
CACCAATGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTT
GCAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATC
CACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCC
AGCCACCATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCA
CCATGA
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