CN185220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16 Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 300 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGA 485 ++GVR R WGS+VSEIR P +KTRIWLGS+ +AE AARAYD A LKG A LNFP S+ + Sbjct: 50 YKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSS 111
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15 Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = -3 Query: 312 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPA 485 +RGVR+R WG +V+EIRLP +TR+WLG+F +AE+AA AYD AAF L+G+ A LNFPA Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPA 200
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = -3 Query: 315 QNDTP---FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 500 Q TP +RGVR+R WG +V+EIRLP +TR+WLG+F +AE+AA AYD+AA+ L+G A LNFP Sbjct: 224 QTTTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP 288
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 261 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 485 +RGVR+R G +V E+R P +KTRIWLG+F +AE AARA+D AA L+G A LNF SA L PES KDIQ Sbjct: 51 YRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQ 125
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.237e-15 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 315 QNDTPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 500 + + FRGVRKR WG Y +EIR PG+KTR+WLG+F +AE+AARAYD+AA +G+ A NFP Sbjct: 28 RKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.237e-15 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = -3 Query: 261 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 485 ++GVRKR+WG +VSEIRLP + RIWLGS+ + EKAARA+D+A F L+G A NFP + ++ +S + +IQ Sbjct: 21 YKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQ 95
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.237e-15 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = -3 Query: 315 PFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 488 P++G+R R+WG +V+EIR P +++RIWLGS+ + E AARAYD+A FYL+G A LNFP Sbjct: 27 PYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFP 84
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 288 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRP 485 FRGVRKR WG + +EIR P +K R+WLG+F SAE+AARAYDSAA L+G A NFP + + P P Sbjct: 28 FRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPP 93
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15 Identity = 44/80 (55.00%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 261 QNDTPFRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 500 + D +RG+R R G +VSEIR P + TRIWLG++ AE AA AYD AA LKG A LNFP S G+ P PES S DI+ Sbjct: 14 RKDPVYRGIRCRS-GKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGSYPVPESTSAADIR 92
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15 Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 +RGVR+R WG +V+EIRLP +TR+WLG+F +AE+AA AYD AA+ L+G+ A LNFP Sbjct: 152 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 208 The following BLAST results are available for this feature:
BLAST of CN185220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185220 ID=CN185220; Name=CN185220; organism=Citrus sinensis; type=EST; length=574bpback to top |