CN185220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = -3 Query: 261 FRGVRKRRWGS-YVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 485 +RGVR+R+ + +VSEIR P + RIWLG+F + E AA AYD AA LKG+ A LNFP S +LP P S S DIQ Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQ 90
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = -3 Query: 303 FRGVRKRRWGSYVSEIRLPGEK-TRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAG 485 +RGVR+R WG Y +EIR P +K R+WLG+F +A +AAR YD AAF L+G+ A LNFP AG Sbjct: 72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAG 133
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 FRGVR+R+WGS+VSEIR P K R+WLG+F +AE AARAYD AA + G A NFP Sbjct: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 63
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = -3 Query: 303 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAG 485 +RGVR+R WG + +EIR P + TR+WLG+F +AE AARAYD+AA +G+ A LNFP + G Sbjct: 61 YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVG 121
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 +RGVR+R WG +V+EIRLP + R+WLG++ +AE AA AYD AA+ L+G A LNFP Sbjct: 136 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFP 192
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 FRGVR+R+WGS+VSEIR P K R+WLG+F +AE AARAYD AA + G A NFP Sbjct: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEK-TRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 FRGVR+R WG + +EIR P R+WLG+F +AE+AARAYD AAF L+G+LA LNFP Sbjct: 20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = -3 Query: 315 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFP 485 +RGVRKR WG +VSEIR+P RIWLGS+ + EKAARAYD+A F ++G NFP Sbjct: 27 YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFP 83
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 261 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDIQ 485 +RGVR+R G +V E+R P +K+RIWLG+F + E AARA+D AA L+G A LNF SA L PE+ K+IQ Sbjct: 54 YRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQ 128
BLAST of CN185220 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = -3 Query: 264 FRGVRKRRWGSYVSEIRLPGEKTRIWLGSFGSAEKAARAYDSAAFYLKGNLATLNFPASAGALPRPESCSRKDI 485 +RGVR+R WG + +EIR P + R+WLG+F +AE AARAYD AA +GN A LNFP + L RP S + + Sbjct: 185 YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENV-KLVRPASTEAQPV 257 The following BLAST results are available for this feature:
BLAST of CN185220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185220 ID=CN185220; Name=CN185220; organism=Citrus sinensis; type=EST; length=574bpback to top |