CN185213

Overview
NameCN185213
Unique NameCN185213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K10_HUMAN (Mitogen-activated protein kinase kinase kinase 10 OS=Homo sapiens GN=MAP3K10 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.013e-15
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  273 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 548
            APE++    S  S+  DV+SFG++LWE+LTGE PY  +   A+  G+  N L  P+P  C   +  L+E+CW PDP  RP F  I +RL V+
Sbjct:  271 APEVIR--LSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKRLEVI 360          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3KL4_HUMAN (Mitogen-activated protein kinase kinase kinase OS=Homo sapiens GN=MLK4 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.485e-15
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = -1
Query:  252 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQTK 548
            APE++   SS  S+  D++S+G++LWE+LTGE PY  +   A+  G+  N L  P+P  C   +  LM++CW  DP +RPSF  I  +L  +  A  T+
Sbjct:  312 APEVIK--SSLFSKGSDIWSYGVLLWELLTGEVPYRGIDGLAVAYGVAVNKLTLPIPSTCPEPFAKLMKECWQQDPHIRPSFALILEQLTAIEGAVMTE 408          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K10_MOUSE (Mitogen-activated protein kinase kinase kinase 10 OS=Mus musculus GN=Map3k10 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  273 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 548
            APE++    S  S+  DV+SFG++LWE+LTGE PY  +   A+  G+  N L  P+P  C   +  L+E+CW PDP  RP F  I ++L V+
Sbjct:  271 APEVIR--LSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKQLEVI 360          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  273 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 548
            APE+L   +   +EK DVFSF IVLWEI+T E+PY  M    I+  +  + LRP VP    + +  L+ +CW+ DP  RPSF EI +RL  M
Sbjct:  660 APEVLR--NDPYTEKADVFSFAIVLWEIVTREDPYQGMPTFQIVISVGQHKLRPIVPPQVSAPFTRLITECWSEDPQQRPSFQEIVKRLEAM 749          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = -1
Query:  282 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 548
            +PELL G     +EKVDV++FGI+LWE+ TGE PY+ +    +   +   +LRPP+P     +   L++ CW  DP+ RPSFTEI   L
Sbjct:  826 SPELLMGED--YTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLL 912          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3KL4_MOUSE (Mitogen-activated protein kinase kinase kinase OS=Mus musculus GN=Mlk4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = -1
Query:  255 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQT 548
            APE++   SS  S+  D++S+G++LWE+LTGE PY  +   A+  G+  N L  P+P  C   +  LM++CW  DP +RPSF  I ++L  +  A  T
Sbjct:  296 APEVIR--SSLFSKGSDIWSYGVLLWELLTGEVPYRGIDGLAVAYGVAVNKLTLPIPSTCPEPFAKLMKECWEQDPHIRPSFALILQQLTAIEEAVLT 391          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = -1
Query:  282 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 548
            APE++   +S  S+  DV+S+G++LWE+LTGE P+  +   A+  G+  N L  P+P  C   +  LME CW PDP  RPSFT I  +L
Sbjct:  310 APEVIR--ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTSILDQL 396          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = -1
Query:  282 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 548
            APE++   +S  S+  DV+S+G++LWE+LTGE P+  +   A+  G+  N L  P+P  C   +  LME CW PDP  RPSFT I  +L
Sbjct:  317 APEVIR--ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 403          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3KSL_DROME (Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = -1
Query:  261 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAAC 545
            PE++  S S  S+  DV+S+G++LWE++TGE PY      ++  G+  NTL  P+P  C   W  LM+ CW  DP  RP F EI ++L   S AC
Sbjct:  314 PEVI--SVSTYSKFSDVWSYGVLLWELITGETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLE--SIAC 404          
BLAST of CN185213 vs. ExPASy Swiss-Prot
Match: M3K11_RAT (Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -1
Query:  267 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 548
            APE++  S+   S+  DV+SFG++LWE+LTGE PY  +   A+  G+  N L  P+P  C   +  LM  CWA DP  RP F  I ++L  + A
Sbjct:  291 APEVIKAST--FSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEALEA 382          
The following BLAST results are available for this feature:
BLAST of CN185213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
M3K10_HUMAN2.013e-1543.48Mitogen-activated protein kinase kinase kinase 10 ... [more]
M3KL4_HUMAN4.485e-1539.39Mitogen-activated protein kinase kinase kinase OS=... [more]
M3K10_MOUSE5.858e-1542.39Mitogen-activated protein kinase kinase kinase 10 ... [more]
DRKC_DICDI5.858e-1545.65Probable serine/threonine-protein kinase drkC OS=D... [more]
Y9955_DICDI9.991e-1543.82Probable serine/threonine-protein kinase DDB_G0267... [more]
M3KL4_MOUSE9.991e-1539.80Mitogen-activated protein kinase kinase kinase OS=... [more]
M3K9_MOUSE9.991e-1543.82Mitogen-activated protein kinase kinase kinase 9 O... [more]
M3K9_HUMAN9.991e-1543.82Mitogen-activated protein kinase kinase kinase 9 O... [more]
M3KSL_DROME1.305e-1442.11Mitogen-activated protein kinase kinase kinase OS=... [more]
M3K11_RAT1.305e-1441.49Mitogen-activated protein kinase kinase kinase 11 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006P20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006P20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185213 ID=CN185213; Name=CN185213; organism=Citrus sinensis; type=EST; length=548bp
TTTTTTTTTTTTTTTTTAGCTTTACACATGAACCAATTACTTTCAGTATT
TGCACAAAACACAATCATATATTACCCTCTCAACGGTGGGCAACTTCTCA
CCACTCTCTATAACATACACACTTTCATGAAATATATAGAAGCAAACAAC
TCTAATCATCGCATCTCATAAAGGTCAAAAGAAGCATCATTAGGGAGTCA
TGGAGTTGGCCATCACTTGGGCACCTGGTTTTGCACCTGATGACCGTGTG
ATTTAGTTTGGCATGCTGCAGACATCACACGCAAGCGTCTGGCAATCTCT
GTAAATGATGGGCGGACCACTGGATCAGGGGCCCAACACTGTTCCATTAG
CAATCTCCATTCTGAGTCACAGAAGCCCGGCACAGGTGGCCTCAATGTGT
TGTTGACAATACCTCCTATGATTGCTCCATAATGCATATTGGCATAAGGC
TCCTCACCAGTGAGAATCTCCCATAGGACAATACCAAAAGAGAACACATC
AACCTTTTCTGACACCTTACTGCTGCTACCATTCAAAAGCTCTGGAGC
back to top