CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_GEOLS (50S ribosomal protein L27 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rpmA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27 Identity = 55/82 (67.07%), Postives = 68/82 (82.93%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS GQRLG K FG ++ K G II RQRGT+ HPG NVG GKD+T+F+LI+G+VKFE+ G DRK++SVYP Sbjct: 2 AHKKGVGSSRNGRDSDGQRLGCKKFGGELVKAGNIIYRQRGTQIHPGNNVGCGKDYTLFALIEGVVKFERLGRDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_GEOSL (50S ribosomal protein L27 OS=Geobacter sulfurreducens GN=rpmA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27 Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS +RLG K FG + K G II RQRGT+ HPG NVG GKD+T+F+LIDG+VKFE+ G DRK++SVYP Sbjct: 2 AHKKGVGSTRNGRDSESKRLGCKKFGGETVKAGNIIYRQRGTQIHPGTNVGCGKDYTLFALIDGVVKFERLGRDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_TRIEI (50S ribosomal protein L27 OS=Trichodesmium erythraeum (strain IMS101) GN=rpmA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26 Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK +G QV K G I+VRQRG+KFH G NVG+GKD+T+F+L++G+V FE+ G RK++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNSQRLGVKRYGGQVVKAGNILVRQRGSKFHAGNNVGVGKDYTLFALVEGMVTFERKGKSRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_WOLSU (50S ribosomal protein L27 OS=Wolinella succinogenes GN=rpmA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGTK HPG NVG+G DHTIF+LIDG+VKFE+ +RK++S+YP Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGGEFVRAGNIIIRQRGTKVHPGSNVGMGTDHTIFALIDGIVKFERKDKERKKVSIYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_NOSP7 (50S ribosomal protein L27 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpmA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26 Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKKG GST+NGRDS QRLGVK +G QV + G I+VRQRGTKFHPG NVG+G D T+F+LIDG+V FE+ G RK++SVY Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRYGGQVVRAGNILVRQRGTKFHPGNNVGIGSDDTLFALIDGVVMFERKGKTRKKVSVY 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_NAUPA (50S ribosomal protein L27 OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=rpmA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26 Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGTK HPG NVGLGKDHTI++LIDG VKFE RK++SVYP E Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGGEFVRAGNIIIRQRGTKVHPGNNVGLGKDHTIYALIDGYVKFEIKDKQRKKVSVYPIE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BACTN (50S ribosomal protein L27 OS=Bacteroides thetaiotaomicron GN=rpmA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26 Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS+KNGR+S +RLGVKIFG + K G II+RQRGT+FHPG+N+G+GKDHT+F+L+DG VKF+ DR+ +S+ P E Sbjct: 2 AHKKGVGSSKNGRESHSKRLGVKIFGGEACKAGNIIIRQRGTEFHPGENIGMGKDHTLFALVDGTVKFKVGREDRRYVSIIPAE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ANAVT (50S ribosomal protein L27 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpmA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26 Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 246 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQPE 509 AHKKG GST+NGRDS QRLGVK FG Q G I+VRQRGTKFH G NVG+GKD T+F+L+DG+V FE+ G RK++SVYP E Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRFGGQAVIAGNILVRQRGTKFHAGNNVGIGKDDTLFALVDGVVTFERKGKSRKKVSVYPAAAAAE 89
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ANASP (50S ribosomal protein L27 OS=Anabaena sp. (strain PCC 7120) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.088e-26 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK FG Q G I+VRQRGTKFH G NVG+GKD T+F+L+DG+V FE+ G RK++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRFGGQAVIAGNILVRQRGTKFHAGNNVGIGKDDTLFALVDGVVTFERKGKSRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RK27_SPIOL (50S ribosomal protein L27, chloroplastic (Fragment) OS=Spinacia oleracea GN=RPL27 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.088e-26 Identity = 54/58 (93.10%), Postives = 58/58 (100.00%), Query Frame = -3 Query: 336 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTI 509 AHKKGAGSTKNGRDS+GQRLGVKI+GDQVAKPGAII+RQRGTKFHPGKNVG+GKDHTI Sbjct: 1 AHKKGAGSTKNGRDSKGQRLGVKIYGDQVAKPGAIIIRQRGTKFHPGKNVGIGKDHTI 58 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |