CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOB6 (50S ribosomal protein L27 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOB1 (50S ribosomal protein L27 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_AZOPC (50S ribosomal protein L27 OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=rpmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GS+KNGR+S +RLGVK+FG ++ K G I+VRQRGTK HPG NVG+GKDHT++SLI+G V F K +R +SV Sbjct: 2 AHKKGVGSSKNGRESHSKRLGVKVFGGEICKAGDILVRQRGTKHHPGNNVGIGKDHTLYSLIEGRVIFRKKQENRSYVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DESAA (50S ribosomal protein L27 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23 Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKK GS++NGRDS GQR GVK +G ++ + G I+VRQ GT+ HPG+NVG+G+D+T+F+ IDG V +E+ G D+K++SVYP Sbjct: 2 AHKKAGGSSRNGRDSNGQRRGVKRYGGEIVRAGNILVRQVGTRIHPGENVGMGRDYTLFATIDGKVAYERKGRDKKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BUCAT (50S ribosomal protein L27 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS QRLGVK FG Q+ G+IIV+QRGTKFHPGKNVG GKDHTIF+++ G V+F+K G Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGVKCFGGQLISAGSIIVKQRGTKFHPGKNVGCGKDHTIFAIVKGKVEFKKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BUCAI (50S ribosomal protein L27 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS QRLGVK FG Q+ G+IIV+QRGTKFHPGKNVG GKDHTIF+++ G V+F+K G Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGVKCFGGQLISAGSIIVKQRGTKFHPGKNVGCGKDHTIFAIVKGKVEFKKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BUCA5 (50S ribosomal protein L27 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS QRLGVK FG Q+ G+IIV+QRGTKFHPGKNVG GKDHTIF+++ G V+F+K G Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGVKCFGGQLISAGSIIVKQRGTKFHPGKNVGCGKDHTIFAIVKGKVEFKKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ROSS1 (50S ribosomal protein L27 OS=Roseiflexus sp. (strain RS-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS++NGRDS + LGVK FG + +PG IIVRQRGTK PG NVGLG+D+TI+SLI+G+V FE+ ++K++SVY E Sbjct: 2 AHKKGVGSSRNGRDSNPKMLGVKRFGGERVQPGTIIVRQRGTKIKPGNNVGLGRDYTIYSLIEGVVTFEQHSRNQKRVSVYATE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEHT (50S ribosomal protein L27 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK AGST+NGRDS +RLGVK FG + G+IIVRQRGT+FHPG NVG+GKDHTIF+ DG V+FE+ GP +RK +++ Sbjct: 2 AHKKAAGSTRNGRDSESKRLGVKRFGGESVLAGSIIVRQRGTRFHPGTNVGIGKDHTIFAKADGKVQFEQKGPLNRKYVTI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_METFK (50S ribosomal protein L27 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYP 509 AHKK GS++NGRDS QRLGVK FGDQ G+IIVRQRGTK HPG+NVG+GKDHT+F+ +DG V F G RK +S+ P Sbjct: 2 AHKKAGGSSRNGRDSNAQRLGVKAFGDQFVSAGSIIVRQRGTKMHPGENVGIGKDHTLFAKVDGKVAFSVKGALGRKLVSIIP 84 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |