CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEP1 (50S ribosomal protein L27 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS +RLGVK++G QV KPG IIVRQRGT+FH G VG+GKDHT+F+ I+G++KFEK G Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKMYGGQVIKPGNIIVRQRGTEFHAGYGVGMGKDHTLFAKIEGVIKFEKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEE4 (50S ribosomal protein L27 OS=Pseudomonas entomophila (strain L48) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS +RLGVK++G QV KPG IIVRQRGT+FH G VG+GKDHT+F+ I+G++KFEK G Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKMYGGQVIKPGNIIVRQRGTEFHAGYGVGMGKDHTLFAKIEGVIKFEKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEAE (50S ribosomal protein L27 OS=Pseudomonas aeruginosa GN=rpmA PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK+FG Q K G I+VRQRGTKFH G VGLGKDHT+F+ +DG+VKFE G RK +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEAB (50S ribosomal protein L27 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK+FG Q K G I+VRQRGTKFH G VGLGKDHT+F+ +DG+VKFE G RK +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEA8 (50S ribosomal protein L27 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK+FG Q K G I+VRQRGTKFH G VGLGKDHT+F+ +DG+VKFE G RK +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEA7 (50S ribosomal protein L27 OS=Pseudomonas aeruginosa (strain PA7) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK+FG Q K G I+VRQRGTKFH G VGLGKDHT+F+ +DG+VKFE G RK +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_POLNS (50S ribosomal protein L27 OS=Polynucleobacter necessarius (strain STIR1) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = -3 Query: 261 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK-QISVYPR 509 A KKG GST+NGRDS +RLGVK+FG + G+II+RQRGT+ HPG NVG+GKDHT+F+LIDG V+F G +K Q+SV PR Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGEYINAGSIIIRQRGTRVHPGANVGIGKDHTLFALIDGQVEFGVKGALKKAQVSVLPR 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CUPTR (50S ribosomal protein L27 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK-QISVYP 509 A KKG GST+NGRDS +RLGVK+FG Q G IIVRQRGT+ H G NVG+GKDHT+F+LIDG V+F GP +K Q+SV P Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQAINAGGIIVRQRGTRVHAGDNVGVGKDHTLFALIDGHVQFAVKGPAKKQQVSVVP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_AZOVD (50S ribosomal protein L27 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYP 509 AHKK GST+NGRDS +RLGVKIFG Q + G IIVRQRGT+FHPG VG+GKDHT+F+ ++G+VKFE G R+ +SV P Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKIFGGQAIRAGNIIVRQRGTQFHPGFGVGIGKDHTLFAKVEGVVKFEVKGAFGRRYVSVVP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOPH (50S ribosomal protein L27 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23 Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GSTKNGRDS +RLG K Q G I+ RQRGTK HPG NVG G D T+F+L+DG++KFE+ G D+KQ SVYP E + Sbjct: 10 AHKKGVGSTKNGRDSESKRLGAKRADGQFVLAGNILYRQRGTKIHPGVNVGRGGDDTLFALVDGVLKFERKGRDKKQASVYPVEAK 95 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |