CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BORPD (50S ribosomal protein L27 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23 Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = -3 Query: 276 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQI 509 A KKG GST+NGRDS +RLGVK+FG Q G+IIVRQRGT+FHPG NVG+GKDHT+F+LIDG V+F G KQ+ Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQQIPAGSIIVRQRGTRFHPGTNVGIGKDHTLFALIDGKVQFGFKGALNKQV 79
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RK27_EMIHU (50S ribosomal protein L27, chloroplastic OS=Emiliania huxleyi GN=rpl27 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23 Identity = 49/70 (70.00%), Postives = 59/70 (84.29%), Query Frame = -3 Query: 300 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEK 509 AHKKGAGSTKNGRDS +RLGVK++G+Q K G II+RQRG F PG NVG+GKD+T+F+L +GLVKFEK Sbjct: 2 AHKKGAGSTKNGRDSNSKRLGVKVYGNQAVKAGGIIIRQRGLTFKPGSNVGVGKDYTLFALKEGLVKFEK 71
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_WIGBR (50S ribosomal protein L27 OS=Wigglesworthia glossinidia brevipalpis GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 52/83 (62.65%), Postives = 67/83 (80.72%), Query Frame = -3 Query: 261 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPR 509 AHKK GST+NGRDS G+RLGVK+FG Q A PG IIVRQRGTKFHPGKNVG GKD+++++L G+V F+K ++K I++ P+ Sbjct: 2 AHKKAGGSTRNGRDSIGKRLGVKLFGGQKAYPGNIIVRQRGTKFHPGKNVGCGKDYSLYALKSGIVFFKK-KKNKKFINIIPK 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_TERTT (50S ribosomal protein L27 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK+FG Q K G I+VRQRGTKFH G+NVG+GKDHT+F+ G VKFE GP +RK +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKLFGGQEVKAGNILVRQRGTKFHGGENVGMGKDHTLFAKTAGKVKFEVKGPKNRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_RALEJ (50S ribosomal protein L27 OS=Ralstonia eutropha (strain JMP134) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQ-ISVYP 509 A KKG GST+NGRDS +RLGVK+FG Q G II+RQRGT+ H G NVG+GKDHT+F+L+DG V+F GP +KQ +SV P Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQAINAGGIIIRQRGTRVHAGDNVGVGKDHTLFALVDGHVQFAVKGPAKKQHVSVVP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_RALEH (50S ribosomal protein L27 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK-QISVYP 509 A KKG GST+NGRDS +RLGVK+FG Q G II+RQRGT+ H G NVG+GKDHT+F+L+DG V+F GP +K Q+SV P Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGQAINAGGIIIRQRGTRVHAGDNVGVGKDHTLFALVDGHVQFAVKGPAKKQQVSVVP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEPW (50S ribosomal protein L27 OS=Pseudomonas putida (strain W619) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK++G QV K G IIVRQRGT+FH G VG+GKDHT+F+ I+G++KFEK G +R+ +S+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKMYGSQVVKAGNIIVRQRGTQFHAGYGVGMGKDHTLFAKIEGVIKFEKKGEFNRRYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_POLSQ (50S ribosomal protein L27 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = -3 Query: 261 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK-QISVYPR 509 A KKG GST+NGRDS +RLGVK+FG + G+II+RQRGT+ HPG NVG+GKDHT+F+LIDG V+F G +K Q+SV PR Sbjct: 2 AQKKGGGSTRNGRDSESKRLGVKVFGGEHINAGSIIIRQRGTRVHPGANVGIGKDHTLFALIDGQVEFGVKGALKKAQVSVLPR 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_EUBR3 (50S ribosomal protein L27 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GSTKNGRDS +RLG K Q K G I+ RQRGTK HPG NVG+G D T+++ +DG+++FE+ G D+KQ SVYP Sbjct: 10 AHKKGVGSTKNGRDSESKRLGAKRADGQFVKAGNILYRQRGTKIHPGTNVGIGGDDTLYAKVDGVLRFERVGRDKKQASVYP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DESOH (50S ribosomal protein L27 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKK GS+KNGRDSRGQR GVK FG + + G I+VRQ GT FHPG NVGLG+D+T+F+ IDG+V +E G RKQ+SVY Sbjct: 2 AHKKAGGSSKNGRDSRGQRRGVKRFGGEKVRAGNILVRQLGTHFHPGNNVGLGRDYTLFAKIDGVVTYESSGA-RKQVSVY 81 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |