CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOD6 (50S ribosomal protein L27 OS=Clostridium difficile (strain 630) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 A KKG GS+KNGRDS +RLGVK F Q+ G+IIVRQRGTK HPG NVG G D T+F+L+DG VKFE+ RK++S+YP Sbjct: 10 ASKKGVGSSKNGRDSISKRLGVKRFDGQLVTAGSIIVRQRGTKIHPGTNVGKGSDDTLFALVDGTVKFERKDKKRKKVSIYP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CELJU (50S ribosomal protein L27 OS=Cellvibrio japonicus (strain Ueda107) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYP 509 AHKKG GS++NGRDS +RLGVK FG ++ G+IIVRQRGTKFH G+N GLGKDHTI++ +DG VKFE G R+ +S+ P Sbjct: 2 AHKKGVGSSRNGRDSEAKRLGVKAFGGELVSGGSIIVRQRGTKFHAGENTGLGKDHTIYAKVDGRVKFEVKGAFGRQYVSIIP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BUCAP (50S ribosomal protein L27 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpmA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = -3 Query: 294 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 509 AHKK GST+NGRDS QRLG+K FG ++ G+IIVRQRGTKFHPGKNVG GKDHTIF+ + G V+F+K G Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGIKCFGGELIPAGSIIVRQRGTKFHPGKNVGCGKDHTIFATVKGKVEFKKKG 73
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RK27_GUITH (50S ribosomal protein L27, chloroplastic OS=Guillardia theta GN=rpl27 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG+GST+NGRDS QRLGVK +G + G I++RQRGT G NVG+GKD+T++SLI+G VKFE+F RK+ISVYP Sbjct: 2 AHKKGSGSTRNGRDSNAQRLGVKKYGGEYVIAGNILIRQRGTNVKAGFNVGIGKDNTLYSLINGEVKFERFDKKRKKISVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPY (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPS (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPP (50S ribosomal protein L27 OS=Yersinia pestis (strain Pestoides F) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPN (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPG (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPE (50S ribosomal protein L27 OS=Yersinia pestis GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |