CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPB (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERPA (50S ribosomal protein L27 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_YERP3 (50S ribosomal protein L27 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGINVGCGKDHTLFALADGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SERP5 (50S ribosomal protein L27 OS=Serratia proteamaculans (strain 568) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGKDHTLFALKDGKVKFEVKGPSNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_MARAV (50S ribosomal protein L27 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYP 509 AHKK AGST+NGRDS +RLGVK +G + G+IIVRQRGT+FH G NVG+GKDHT+F+ +G VKFE GP +RK +S+ P Sbjct: 2 AHKKAAGSTRNGRDSESKRLGVKRYGGESVSAGSIIVRQRGTRFHAGSNVGIGKDHTLFAKAEGQVKFETKGPQNRKFVSIVP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LACAC (50S ribosomal protein L27 OS=Lactobacillus acidophilus GN=rpmA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AH KG GST NGR+S G+RLG K Q G+II RQRGTK HPGKNVG G D T+F+L++G+VKFE+ G +KQ+SVYP E Sbjct: 10 AHHKGGGSTANGRNSAGRRLGAKAGDGQEIHAGSIIYRQRGTKIHPGKNVGQGGDDTLFALVNGVVKFERLGKYKKQVSVYPAE 93
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_VIBCM (50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYPRE 509 AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTKFH G NVG+GKDHT+F+L DG VKFE GP +RK +S+ E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_VIBCH (50S ribosomal protein L27 OS=Vibrio cholerae GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYPRE 509 AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTKFH G NVG+GKDHT+F+L DG VKFE GP +RK +S+ E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_VIBC3 (50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYPRE 509 AHKK GST+NGRDS +RLGVK FG + G IIVRQRGTKFH G NVG+GKDHT+F+L DG VKFE GP +RK +S+ E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PSEMY (50S ribosomal protein L27 OS=Pseudomonas mendocina (strain ymp) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK++G QV K G IIVRQRGT+FHPG VG+GKDHT+F+ I+G+VKFE G R+ +SV Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKMYGGQVIKAGNIIVRQRGTEFHPGFGVGMGKDHTLFAKIEGVVKFEVKGAFGRRYVSV 82 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |