CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PROMH (50S ribosomal protein L27 OS=Proteus mirabilis (strain HI4320) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG G+DHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALADGKVKFEVKGPNNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PECCP (50S ribosomal protein L27 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 54/81 (66.67%), Postives = 61/81 (75.31%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS QRLGVK FG + G IIVRQRGTKFH G NVG GKDHT+F+L DG V+FE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSNAQRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGCGKDHTLFALTDGKVQFEVKGPKNRKYISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_KLEP7 (50S ribosomal protein L27 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG G+DHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALTDGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_KLEP3 (50S ribosomal protein L27 OS=Klebsiella pneumoniae (strain 342) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG G+DHT+F+L DG VKFE GP +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLFALTDGKVKFEVKGPKNRKFISI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURVG (50S ribosomal protein L27 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURS3 (50S ribosomal protein L27 OS=Burkholderia sp. (strain 383) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURCM (50S ribosomal protein L27 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURCJ (50S ribosomal protein L27 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURCH (50S ribosomal protein L27 OS=Burkholderia cenocepacia (strain HI2424) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BURCC (50S ribosomal protein L27 OS=Burkholderia cenocepacia (strain MC0-3) GN=rpmA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK++G Q G IIVRQRGT+ H G+NVG+GKDHT+F+L+DG VKF G D+K + + Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTRMHAGENVGMGKDHTLFALVDGHVKFATKGADKKHLVI 81 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |