CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNP6 (50S ribosomal protein L27 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK FG +V + G+IIVRQRGTKFHPG NVG G D T+F+LIDG+V FE+ G K++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKKFGGEVVRSGSIIVRQRGTKFHPGVNVGRGGDDTLFALIDGVVTFERKGKGGKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNE7 (50S ribosomal protein L27 OS=Synechococcus elongatus (strain PCC 7942) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK FG +V + G+IIVRQRGTKFHPG NVG G D T+F+LIDG+V FE+ G K++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKKFGGEVVRSGSIIVRQRGTKFHPGVNVGRGGDDTLFALIDGVVTFERKGKGGKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PELPD (50S ribosomal protein L27 OS=Pelobacter propionicus (strain DSM 2379) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKK GS++NGRDS+GQRLG K FG + K G II RQRGT+ HPG NVG GKD+T+F+LI+G+V FE+ G DRK++SVYP Sbjct: 2 AHKKAGGSSRNGRDSKGQRLGCKKFGGETVKAGNIIYRQRGTQIHPGNNVGCGKDYTLFALIEGIVTFERMGRDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELHP (50S ribosomal protein L27 OS=Helicobacter hepaticus GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG Q + G IIVRQRGTK HPG NVGLGKDHTI++LIDG+VKF++ +RK++SV P Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKRFGSQFVRAGNIIVRQRGTKVHPGDNVGLGKDHTIYALIDGVVKFQQKDKNRKKVSVIP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_GEOMG (50S ribosomal protein L27 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS +RLG K +G + K G II RQRGT+ HPG NVG GKD+T+F+LIDG+VKFE+ G DRK++SVYP Sbjct: 2 AHKKGVGSTRNGRDSESKRLGCKKYGGENVKAGNIIYRQRGTQIHPGTNVGCGKDYTLFALIDGVVKFERLGRDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMFF (50S ribosomal protein L27 OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=rpmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT HPG NVG+G+DHTIF+L+DG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHPGNNVGIGRDHTIFALVDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THEYD (50S ribosomal protein L27 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=rpmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS+ +RLGVK FG Q K G I+VRQRGTKFHPG NVG+G D+T+F+LIDG+VKFE+ R ++SVYP Sbjct: 2 AHKKGVGSSRNGRDSQAKRLGVKRFGGQFVKAGNILVRQRGTKFHPGANVGVGSDYTLFALIDGIVKFERKDKQRLKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BACFR (50S ribosomal protein L27 OS=Bacteroides fragilis GN=rpmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS+KNGR+S+ +RLGVKIFG + K G IIVRQRGT+FHPG+N+G+GKDHT+F+L+DG V F+ DR+ +S+ P E Sbjct: 2 AHKKGVGSSKNGRESQSKRLGVKIFGGEACKAGNIIVRQRGTEFHPGENIGMGKDHTLFALVDGTVNFKVGREDRRYVSIIPAE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BACFN (50S ribosomal protein L27 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rpmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS+KNGR+S+ +RLGVKIFG + K G IIVRQRGT+FHPG+N+G+GKDHT+F+L+DG V F+ DR+ +S+ P E Sbjct: 2 AHKKGVGSSKNGRESQSKRLGVKIFGGEACKAGNIIVRQRGTEFHPGENIGMGKDHTLFALVDGTVNFKVGREDRRYVSIIPAE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THEEB (50S ribosomal protein L27 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26 Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GST+NGRDS QRLGVK FG +V K G I+VRQRGTKFHPG NV G D T+F+ I G+V FE++G +RK++SVYP E Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRFGGEVVKAGYILVRQRGTKFHPGVNVARGGDDTLFATIAGVVTFERYGKNRKRVSVYPLE 85 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |