CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_GLOVI (50S ribosomal protein L27 OS=Gloeobacter violaceus GN=rpmA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK +G + K G I++RQRGTK HPG NVG G D T+F+LI+G+V FE+ G DRK++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRYGGERVKAGNILIRQRGTKIHPGANVGRGSDDTLFALIEGIVTFERLGRDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMHC (50S ribosomal protein L27 OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=rpmA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+G DHTIF+LIDG+VKFE+F RKQ+SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGIGTDHTIFALIDGVVKFERFDKTRKQVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNP2 (50S ribosomal protein L27 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GST+NGRDSR QRLGVK +G Q G+I+VRQRGTK HPG NVG G D T+F+L+DG+VKFE + R+++SVYP + Sbjct: 2 AHKKGTGSTRNGRDSRAQRLGVKRYGGQTVTTGSILVRQRGTKVHPGNNVGRGGDDTLFALVDGIVKFEHYKRGRRKVSVYPAD 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMJR (50S ribosomal protein L27 OS=Campylobacter jejuni (strain RM1221) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMJJ (50S ribosomal protein L27 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMJE (50S ribosomal protein L27 OS=Campylobacter jejuni GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMJD (50S ribosomal protein L27 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMJ8 (50S ribosomal protein L27 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ DRK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CYAP7 (50S ribosomal protein L27 OS=Cyanothece sp. (strain PCC 7424) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25 Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = -3 Query: 240 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQPENP 509 AHKKG GST+NGRDS+ +RLGVK +G QV + G I+VRQRGTKFHPG NVG G D T+F+LIDG+VKFE R++ISVYP V E P Sbjct: 2 AHKKGTGSTRNGRDSQSKRLGVKRYGGQVVRAGNILVRQRGTKFHPGNNVGRGSDDTLFALIDGVVKFEYKTRSRQKISVYP--VPQEEP 89
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMC1 (50S ribosomal protein L27 OS=Campylobacter concisus (strain 13826) GN=rpmA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVGLGKDHTIF+L+DG VKFE+ +RK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGLGKDHTIFALVDGFVKFERLDKNRKKVSVYP 83 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |