CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ACAM1 (50S ribosomal protein L27 OS=Acaryochloris marina (strain MBIC 11017) GN=rpmA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK +G +V + G II+RQRGTK HPG NVG G D T+F+ IDG+V FE+ G RK++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRYGGEVVRAGNIIIRQRGTKVHPGNNVGRGSDDTLFATIDGIVTFERKGKSRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CYAA5 (50S ribosomal protein L27 OS=Cyanothece sp. (strain ATCC 51142) GN=rpmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDSR QRLGVK +G QV K G I++RQRGTK HPG NVG G D T+F+LIDG+V FE R+++SVYP Sbjct: 2 AHKKGTGSTRNGRDSRSQRLGVKRYGGQVVKAGNILIRQRGTKVHPGNNVGRGNDDTLFALIDGIVTFEYKTKSRRKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CARHZ (50S ribosomal protein L27 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rpmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = -3 Query: 255 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREV 509 AHKKG GS+KNGRDS+ +RLGVK + Q G+I+VRQRGTKFHPG NVG+G D T+F+ IDG V FE+ G ++KQ+SVYP+ V Sbjct: 2 AHKKGVGSSKNGRDSKAKRLGVKRYAGQFVTAGSILVRQRGTKFHPGNNVGIGGDDTLFAKIDGYVVFERKGKNKKQVSVYPQNV 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMC5 (50S ribosomal protein L27 OS=Campylobacter curvus (strain 525.92) GN=rpmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVGLGKDHTIF+LIDG VKFE+ +RK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGSNVGLGKDHTIFALIDGFVKFERKDKNRKKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNAS (50S ribosomal protein L27 OS=Syntrophus aciditrophicus (strain SB) GN=rpmA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKKG GS++NGRDS QR GVK++G Q G+II+RQ GTK HPG NVG+GKD+T+FSLIDG+VKFE+ RK++SVY Sbjct: 2 AHKKGQGSSRNGRDSNAQRRGVKVYGGQSIHAGSIIIRQLGTKIHPGNNVGMGKDYTLFSLIDGVVKFERLDKKRKKVSVY 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_FUSNN (50S ribosomal protein L27 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpmA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKKG GS KNGRDS + LGVK + +V K G IIVRQRGTK+H G N+G+GKDHT+F+LIDG VKFE+ G ++KQIS+Y Sbjct: 11 AHKKGQGSVKNGRDSNPKYLGVKKYDGEVVKAGNIIVRQRGTKYHAGNNMGIGKDHTLFALIDGYVKFERLGKNKKQISIY 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THERP (50S ribosomal protein L27 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = -3 Query: 255 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREV 509 AHKKG GST+NGRDSR +RLGVK + Q G+++VRQRGT F PG+NVG+G+D+T+F+LIDG VKFE D++++SVYP V Sbjct: 2 AHKKGGGSTRNGRDSRAKRLGVKRYDGQFVPAGSVLVRQRGTVFRPGRNVGMGRDYTLFALIDGYVKFEPISRDKRRVSVYPEPV 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPBP (50S ribosomal protein L27 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = -3 Query: 261 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPR 509 A KKG GSTKNGRDS +RLGVK++G Q A G IIVRQRGT++ PGKNVG+G+DHT+++L+DG+V FE +R+QISVYP+ Sbjct: 2 ATKKGGGSTKNGRDSVSKRLGVKVYGGQQAIAGNIIVRQRGTEYKPGKNVGIGRDHTLYALVDGIVTFEHVTKERQQISVYPK 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPBA (50S ribosomal protein L27 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = -3 Query: 261 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPR 509 A KKG GSTKNGRDS +RLGVK++G Q A G IIVRQRGT++ PGKNVG+G+DHT+++L+DG+V FE +R+QISVYP+ Sbjct: 2 ATKKGGGSTKNGRDSVSKRLGVKVYGGQQAIAGNIIVRQRGTEYKPGKNVGIGRDHTLYALVDGIVTFEHVTKERQQISVYPK 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAMLR (50S ribosomal protein L27 OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + + G II+RQRGT H G NVG+GKDHTIF+LIDG VKFE+ +RK++SVYP Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGNNVGMGKDHTIFALIDGFVKFERKDKNRKKVSVYP 83 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |