CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BARQU (50S ribosomal protein L27 OS=Bartonella quintana GN=rpmA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21 Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK FG + G II+RQRGT++HPG NVG+GKDHT+F+L +G+V F++ +R +SV Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGETVIAGNIIIRQRGTRWHPGDNVGIGKDHTLFALSNGVVSFQRKANNRSYVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BACST (50S ribosomal protein L27 OS=Bacillus stearothermophilus GN=rpmA PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 A KKG GSTK+GRDS +RLG K Q G+I+ RQRGTK HPG NVG G D T+++ IDG+V+FE+ G DRK++SVYP Sbjct: 2 ASKKGVGSTKDGRDSIAKRLGAKRADGQFVTGGSILYRQRGTKVHPGLNVGRGGDDTLYAKIDGIVRFERLGRDRKRVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_VARPS (50S ribosomal protein L27 OS=Variovorax paradoxus (strain S110) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISVYP 509 A KKG GST+NGRDS+ + LGVK FG ++ G+IIVRQRGT+FHPG NVG+GKDHT+F+L+DG V F G ++ ++V P Sbjct: 2 AQKKGGGSTRNGRDSKPKMLGVKAFGGELISAGSIIVRQRGTQFHPGVNVGVGKDHTLFALVDGHVSFGVKGALNKHMVNVTP 84
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_TOLAT (50S ribosomal protein L27 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK GS++NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG GKDHT+F+ G +KFE GP +RK +S+ Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKRFGGESVLAGSIIVRQRGTKFHAGVNVGCGKDHTLFATATGTIKFEVKGPNNRKFVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_RHOPT (50S ribosomal protein L27 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKK GS++NGRDS G+RLGVK FG + PG II RQRGT++HPG NVG+G DHT+F+ ++G V+F R +SV P +Q Sbjct: 2 AHKKAGGSSRNGRDSAGKRLGVKAFGGEHVIPGNIIARQRGTQWHPGLNVGMGTDHTLFAKVEGRVEFRAKANGRTYVSVLPIAMQ 87
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_RHOPA (50S ribosomal protein L27 OS=Rhodopseudomonas palustris GN=rpmA PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKK GS++NGRDS G+RLGVK FG + PG II RQRGT++HPG NVG+G DHT+F+ ++G V+F R +SV P +Q Sbjct: 2 AHKKAGGSSRNGRDSAGKRLGVKAFGGEHVIPGNIIARQRGTQWHPGLNVGMGTDHTLFAKVEGRVEFRAKANGRTYVSVLPIAMQ 87
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_METSB (50S ribosomal protein L27 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS G+RLGVK FG + G IIVRQRGTK+HPG NVG+G DHT+F+L DG VKF R +SV Sbjct: 2 AHKKAGGSSRNGRDSAGRRLGVKKFGGERVVSGNIIVRQRGTKWHPGANVGIGVDHTLFALADGAVKFLTKDKGRSYVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HAES2 (50S ribosomal protein L27 OS=Haemophilus somnus (strain 2336) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 51/81 (62.96%), Postives = 59/81 (72.84%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG-PDRKQISV 509 A KK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG+GKDHT+F+ DG VKFE G RK +SV Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSV 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HAES1 (50S ribosomal protein L27 OS=Haemophilus somnus (strain 129Pt) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 51/81 (62.96%), Postives = 59/81 (72.84%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG-PDRKQISV 509 A KK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG+GKDHT+F+ DG VKFE G RK +SV Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSV 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HAEPS (50S ribosomal protein L27 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG-PDRKQISV 509 A KK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG+GKDHT+F+ DG VKFE G +RK +S+ Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |