CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HAEDU (50S ribosomal protein L27 OS=Haemophilus ducreyi GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG-PDRKQISV 509 A KK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG+GKDHT+F+ DG VKFE G +RK +S+ Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DELAS (50S ribosomal protein L27 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = -3 Query: 306 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKF 509 A KKG GST+NGRDS+ + LGVK FG ++ G+IIVRQRGTKFHPG NVG+GKDHT+++L+DG V F Sbjct: 2 AQKKGGGSTRNGRDSKPKMLGVKAFGGELITAGSIIVRQRGTKFHPGDNVGVGKDHTLYALVDGHVSF 69
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CHLPB (50S ribosomal protein L27 OS=Chlorobium phaeobacteroides (strain BS1) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GSTKNGRDS + LG+K G G+IIVRQRGT F PG N G+GKDHTIF+L+DG V F D+K I + P Sbjct: 2 AHKKGGGSTKNGRDSNPKYLGIKASGGSSVSAGSIIVRQRGTVFKPGNNAGIGKDHTIFALVDGNVHFRNTRNDKKLIDILP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CAUSK (50S ribosomal protein L27 OS=Caulobacter sp. (strain K31) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS+ NGRDS G+RLGVK FG Q G II+RQRGTKF+PG NVG+GKDHT+F+LI+G V F +R ++V Sbjct: 2 AHKKSGGSSSNGRDSAGRRLGVKKFGGQKVAAGNIIIRQRGTKFYPGANVGMGKDHTLFALIEGAVAFVTKRNNRTYVNV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BIFLO (50S ribosomal protein L27 OS=Bifidobacterium longum GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKGA S++NGRDS Q LGVK FG + G IIVRQRGT FHPG NVG+GKDHT+F+L DG VKF DRK + V Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF-GVRRDRKVVDV 80
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BIFLI (50S ribosomal protein L27 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKGA S++NGRDS Q LGVK FG + G IIVRQRGT FHPG NVG+GKDHT+F+L DG VKF DRK + V Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF-GVRRDRKVVDV 80
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BIFLD (50S ribosomal protein L27 OS=Bifidobacterium longum (strain DJO10A) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKGA S++NGRDS Q LGVK FG + G IIVRQRGT FHPG NVG+GKDHT+F+L DG VKF DRK + V Sbjct: 2 AHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKF-GVRRDRKVVDV 80
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_AZOSE (50S ribosomal protein L27 OS=Azoarcus sp. (strain EbN1) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GS++NGRDS +RLGVK +G Q G IIVRQRGT++HPG+NVG+GKDHT+F+L DG V+F G R++ V Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKRYGGQFVLAGNIIVRQRGTEYHPGENVGIGKDHTLFALKDGTVQFTIKGAQRRRTVV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ANOFW (50S ribosomal protein L27 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 A KKG GSTKNGRDS +RLG K Q G+I+ RQRGTK +PG NVG G D T+++ +DG+V+FE+ G DRK++SVYP Sbjct: 10 ASKKGVGSTKNGRDSIAKRLGAKRADGQFVTGGSILYRQRGTKIYPGLNVGRGGDDTLYAKVDGIVRFERMGRDRKKVSVYP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ACTPJ (50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG-PDRKQISV 509 A KK GST+NGRDS +RLGVK FG + G+IIVRQRGTKFH G NVG+GKDHT+F+ DG VKFE G +RK +S+ Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLFATADGKVKFEVKGEKNRKYVSI 82 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |