CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BACV8 (50S ribosomal protein L27 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS+KNGR+S +RLGVKIFG Q K G IIVRQRGT+FHPG+N+G+G+DHT+F+L+DG V F+ DR+ +SV P Sbjct: 2 AHKKGVGSSKNGRESASKRLGVKIFGGQACKAGNIIVRQRGTEFHPGENIGMGRDHTLFALVDGTVCFKVGRNDRRSVSVVP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ARCB4 (50S ribosomal protein L27 OS=Arcobacter butzleri (strain RM4018) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKKG GST+N RDS G+RLGVK +G +V + G II+RQRGT+ H G+NVG+GKDHTI+SLIDG+VKFE+ +RK++SVY Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKYGGEVVRAGNIIIRQRGTRVHLGQNVGMGKDHTIYSLIDGVVKFEQKDKNRKKVSVY 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNY3 (50S ribosomal protein L27 OS=Synechocystis sp. (strain PCC 6803) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS QRLGVK +G Q G+IIVRQRGT+ HPG NVG GKD T+F+LIDG+VKFE R+++SVYP Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRYGGQTVTAGSIIVRQRGTQVHPGNNVGRGKDDTLFALIDGVVKFEHKTRSRRKVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNWW (50S ribosomal protein L27 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS+KNGRDS+ +RLGVK + Q+ G I+VRQRGTK HPG+NV +G D T+F++IDG VKFE+ G D+KQ+SVYP E Sbjct: 10 AHKKGVGSSKNGRDSQSKRLGVKRYDGQIVTAGNILVRQRGTKIHPGQNVMIGGDDTLFAIIDGRVKFERKGRDKKQVSVYPLE 93
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNJB (50S ribosomal protein L27 OS=Synechococcus sp. GN=rpmA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = -3 Query: 255 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREV 509 AHKKG GST+NGRDS +RLGVK +G ++ PG I+VRQRGTKFHPG NV +G D T++S++ G+V FE++G R+++SVYP EV Sbjct: 2 AHKKGTGSTRNGRDSNAKRLGVKRYGGELVHPGHILVRQRGTKFHPGVNVRIGGDDTLYSVVTGIVTFERYGKWRQKVSVYPAEV 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BDEBA (50S ribosomal protein L27 OS=Bdellovibrio bacteriovorus GN=rpmA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = -3 Query: 255 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREV 509 A KK GSTKNGRDS+ +RLGVK FG + PG IIVRQRGTKFH G NV +G+D+TI+S+++GLVKFE+F +R ++SVYP+ V Sbjct: 2 ASKKAGGSTKNGRDSQSKRLGVKRFGGEKVLPGTIIVRQRGTKFHLGNNVKMGRDYTIYSVVEGLVKFERFSKERFKVSVYPKAV 86
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SULDN (50S ribosomal protein L27 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK +G +V PG II+RQRGTK HPGKNVG+GKDHTIF+L+ G+V F + R+Q+S+ P Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKYGGEVVIPGNIIIRQRGTKIHPGKNVGMGKDHTIFALVAGVVTFHRKDKKRQQVSIVP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELPY (50S ribosomal protein L27 OS=Helicobacter pylori GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE +RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELPS (50S ribosomal protein L27 OS=Helicobacter pylori (strain Shi470) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE +RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELPH (50S ribosomal protein L27 OS=Helicobacter pylori (strain HPAG1) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE +RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSV 81 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |