CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELPG (50S ribosomal protein L27 OS=Helicobacter pylori (strain G27) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE +RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELP2 (50S ribosomal protein L27 OS=Helicobacter pylori (strain P12) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE +RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DESHY (50S ribosomal protein L27 OS=Desulfitobacterium hafniense (strain Y51) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS QRLGVK Q G IIVRQRGTKFHPGKN GLGKD T+F+ IDG VKFE+ RKQ+S+YP Sbjct: 10 AHKKGVGSSRNGRDSNAQRLGVKRGDGQFVTAGNIIVRQRGTKFHPGKNCGLGKDDTLFATIDGYVKFERKDRSRKQVSIYP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DESHD (50S ribosomal protein L27 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rpmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS QRLGVK Q G IIVRQRGTKFHPGKN GLGKD T+F+ IDG VKFE+ RKQ+S+YP Sbjct: 10 AHKKGVGSSRNGRDSNAQRLGVKRGDGQFVTAGNIIVRQRGTKFHPGKNCGLGKDDTLFATIDGYVKFERKDRSRKQVSIYP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_ROSCS (50S ribosomal protein L27 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpmA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25 Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GS++NGRDS + LGVK FG + KPG IIVRQRGTKF PG NVGLG+D+TI+SLIDG+V FE+ ++K++SVY E Sbjct: 2 AHKKGVGSSRNGRDSNPKMLGVKRFGGERVKPGMIIVRQRGTKFKPGANVGLGRDYTIYSLIDGVVTFEQHSRNQKRVSVYAAE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELPJ (50S ribosomal protein L27 OS=Helicobacter pylori J99 GN=rpmA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++LIDG+VKFE RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKIHPGNNVGMGKDHTLYALIDGVVKFEHKDRSRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PELCD (50S ribosomal protein L27 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rpmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24 Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKK GS+KNGRDS G+RLGVK FG Q G+I+VRQRGT HPG NVG GKD+T+++L+DG+V FE+ G D+K++SVY Sbjct: 2 AHKKAGGSSKNGRDSAGKRLGVKRFGGQQVTAGSILVRQRGTTIHPGANVGCGKDYTLYALVDGVVSFERKGKDKKKVSVY 82
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOB8 (50S ribosomal protein L27 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rpmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24 Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG+NVG GKD T+F+ +DG+VKFE+ G D+K+ SVYP +V+ Sbjct: 10 AHKKGVGSSKNGRDSESKRLGVKSADGQFVLAGNILVRQRGTKIHPGENVGKGKDDTLFAKVDGVVKFERLGRDKKRASVYPVDVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNFM (50S ribosomal protein L27 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKK GS++NGRDS GQR GVK +G + + G I+VRQ GTKFHPGKNVGLG+D+T+F++IDG+V FE R+QISVYP Q Sbjct: 2 AHKKAGGSSRNGRDSAGQRRGVKRYGGEFVRAGNILVRQLGTKFHPGKNVGLGRDYTLFAMIDGIVAFEYKDKTRQQISVYPIPAQ 87
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CYAP8 (50S ribosomal protein L27 OS=Cyanothece sp. (strain PCC 8801) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDSR QRLGVK +G QV K G I+VRQRGTK +PG NVG G D T+F+LIDG+V FE +K++SVYP Sbjct: 2 AHKKGTGSTRNGRDSRAQRLGVKRYGGQVVKAGNILVRQRGTKVYPGNNVGRGSDDTLFALIDGIVTFEYKTRSQKKVSVYP 83 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |