CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOTH (50S ribosomal protein L27 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+NGRDS +RLGVK Q K G I+VRQRGTK HPG NVG GKD T+F+L+DG VKF + G DRKQ+S+ P Sbjct: 10 AHKKGVGSTRNGRDSESKRLGVKRGDGQFVKAGNILVRQRGTKIHPGLNVGKGKDDTLFALVDGRVKFSRLGKDRKQVSIIP 91
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBA (50S ribosomal protein L27 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK + G IIVRQRGTK HPG NVG GKD T+F+ IDG+VKFE+ G D+K+ SVYP +V+ Sbjct: 10 AHKKGVGSSKNGRDSESKRLGVKSTDGEFVLAGNIIVRQRGTKIHPGNNVGRGKDDTLFAKIDGVVKFERVGKDKKKASVYPVDVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SYNJA (50S ribosomal protein L27 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AHKKG GST+NGRDS +RLGVK FG ++ PG I+VRQRGTKFHPG NV G D T+F++ G+V FE++G RK++SVYP E Sbjct: 2 AHKKGTGSTRNGRDSNAKRLGVKCFGGELVHPGYILVRQRGTKFHPGVNVRRGGDDTLFAVATGIVTFERYGKWRKKVSVYPVE 85
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPIN (50S ribosomal protein L27 OS=Leptospira interrogans GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS+KNGRDS QRLGVK FG + G I+VRQRGTKF PG NVGLGKDHT+F+L+ G VKFE + Q+SVYP Sbjct: 2 AHKKGGGSSKNGRDSNSQRLGVKRFGGESVLAGNILVRQRGTKFRPGNNVGLGKDHTLFALVTGKVKFEMVTKLKMQVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPIC (50S ribosomal protein L27 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS+KNGRDS QRLGVK FG + G I+VRQRGTKF PG NVGLGKDHT+F+L+ G VKFE + Q+SVYP Sbjct: 2 AHKKGGGSSKNGRDSNSQRLGVKRFGGESVLAGNILVRQRGTKFRPGNNVGLGKDHTLFALVTGKVKFEMVTKLKMQVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPBL (50S ribosomal protein L27 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS+KNGRDS QRLGVK FG + G I+VRQRGTKF PG NVGLGKDHT+F+L+ G VKFE + Q+SVYP Sbjct: 2 AHKKGGGSSKNGRDSNSQRLGVKRFGGESVLAGNILVRQRGTKFRPGNNVGLGKDHTLFALVTGKVKFEMVTKLKMQVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LEPBJ (50S ribosomal protein L27 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS+KNGRDS QRLGVK FG + G I+VRQRGTKF PG NVGLGKDHT+F+L+ G VKFE + Q+SVYP Sbjct: 2 AHKKGGGSSKNGRDSNSQRLGVKRFGGESVLAGNILVRQRGTKFRPGNNVGLGKDHTLFALVTGKVKFEMVTKLKMQVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELMI (50S ribosomal protein L27 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = -3 Query: 267 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVY 509 AHKKG GS++NGRDS +RLGVK Q G I+VRQRGTK HPG NVGLG D T+F+LIDG+VKFE+ G D+KQ+SVY Sbjct: 10 AHKKGVGSSRNGRDSEAKRLGVKRSDGQAVLSGNILVRQRGTKIHPGNNVGLGSDDTLFALIDGVVKFERKGRDKKQVSVY 90
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_DESPS (50S ribosomal protein L27 OS=Desulfotalea psychrophila GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKK GS++NGRDS GQR GVK FG + + G I++RQ GTK HPG NVG G+D+T+F+ IDG+VKFE FG ++K++SVYP Sbjct: 2 AHKKAGGSSRNGRDSAGQRRGVKKFGGEPVRSGNILIRQLGTKVHPGTNVGCGRDYTLFAKIDGVVKFEDFGKNKKRVSVYP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOK5 (50S ribosomal protein L27 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLG K Q G I+VRQRGTK HPGKNVG G D T+FS IDG+V++E+FG +K+ SVYP EV+ Sbjct: 10 AHKKGMGSSKNGRDSESKRLGTKSADGQFVLAGNILVRQRGTKIHPGKNVGRGSDDTLFSKIDGIVRYERFGKTKKKASVYPLEVE 95 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |