CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOK1 (50S ribosomal protein L27 OS=Clostridium kluyveri (strain NBRC 12016) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLG K Q G I+VRQRGTK HPGKNVG G D T+FS IDG+V++E+FG +K+ SVYP EV+ Sbjct: 10 AHKKGMGSSKNGRDSESKRLGTKSADGQFVLAGNILVRQRGTKIHPGKNVGRGSDDTLFSKIDGIVRYERFGKTKKKASVYPLEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBB (50S ribosomal protein L27 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK + G IIVRQRGTK HPG NVG GKD T+F+ IDG+VKFE+ G D+K+ SVYP V+ Sbjct: 10 AHKKGVGSSKNGRDSESKRLGVKSTDGEFVLAGNIIVRQRGTKIHPGNNVGRGKDDTLFAKIDGVVKFERVGKDKKKASVYPVNVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_BAUCH (50S ribosomal protein L27 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rpmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24 Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKK GST+NGRDS +RLGVKIFG Q+AK G+II+RQRGTKFHPG NVG GKDHT+F+L G V F+ +RK IS+ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKIFGHQIAKAGSIIIRQRGTKFHPGTNVGCGKDHTLFALTKGKVHFQTKKGNRKFISI 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THETN (50S ribosomal protein L27 OS=Thermoanaerobacter tengcongensis GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS +RLGVK Q G I+VRQRGTK HPG NVG+GKD T+F+LIDG V FE+ G D+KQ+SVYP Sbjct: 7 AHKKGVGSSRNGRDSESKRLGVKRSDGQFVLAGNILVRQRGTKIHPGANVGIGKDDTLFALIDGYVVFERKGRDKKQVSVYP 88
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SULNB (50S ribosomal protein L27 OS=Sulfurovum sp. (strain NBC37-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GST+N RDS G+RLGVK FG + PG II+RQRGTK HPG VG+GKDHTIF++++G+VKFE +K++SV P Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGGEKVIPGNIIIRQRGTKVHPGNGVGMGKDHTIFAMVEGVVKFENRSRSQKRVSVVP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_HELAH (50S ribosomal protein L27 OS=Helicobacter acinonychis (strain Sheeba) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24 Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GST+N RDS G+RLGVK FG + + G IIVRQRGTK HPG NVG+GKDHT+++L DG+VKFE RK++SV Sbjct: 2 AHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALTDGVVKFEYKDKSRKKVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THEPX (50S ribosomal protein L27 OS=Thermoanaerobacter sp. (strain X514) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = -3 Query: 243 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQPEN 509 AHKKG GS++NGRDS +RLGVK Q G I+VRQRGTK HPG NVG GKD T+F+LIDG V FE+ G D+KQ+SVYP +N Sbjct: 7 AHKKGVGSSRNGRDSESKRLGVKRADGQFVLAGNILVRQRGTKIHPGVNVGKGKDDTLFALIDGYVTFERKGRDKKQVSVYPERKVAQN 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_THEP3 (50S ribosomal protein L27 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = -3 Query: 243 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQPEN 509 AHKKG GS++NGRDS +RLGVK Q G I+VRQRGTK HPG NVG GKD T+F+LIDG V FE+ G D+KQ+SVYP +N Sbjct: 7 AHKKGVGSSRNGRDSESKRLGVKRADGQFVLAGNILVRQRGTKIHPGVNVGKGKDDTLFALIDGYVTFERKGRDKKQVSVYPERKVAQN 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CYTH3 (50S ribosomal protein L27 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGR+S +RLGVK+FG Q A G IIVRQRGT+ HPG+NVG+GKDHT+F+L DG+V F K DR +SV P Sbjct: 2 AHKKGVGSSRNGRESHSKRLGVKLFGGQAAIAGNIIVRQRGTQHHPGENVGIGKDHTLFALTDGVVTFRKGRQDRSFVSVLP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CHRSD (50S ribosomal protein L27 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24 Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGP-DRKQISV 509 AHKK AGS++NGRDS +RLGVK+FG Q A G IIVRQRGTKFH G VG+GKDHT+F+L DG++KFE GP +RK +SV Sbjct: 2 AHKKAAGSSRNGRDSESKRLGVKLFGGQAATAGNIIVRQRGTKFHAGSGVGIGKDHTLFALNDGVIKFETKGPKNRKFVSV 82 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |