CN185203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOAB (50S ribosomal protein L27 OS=Clostridium acetobutylicum GN=rpmA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK + G IIVRQRGTK HPG NVG GKD T+F+ DGLVKFEK G D+K SVYP E++ Sbjct: 10 AHKKGMGSSKNGRDSESKRLGVKASDGEFVLAGNIIVRQRGTKIHPGVNVGRGKDDTLFAKADGLVKFEKRGKDKKFASVYPVEIE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_XANP2 (50S ribosomal protein L27 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKK GS++NGRDS G+RLGVK FG Q PG IIVRQRGTK+HPG NVG+GKDHT+F+L++G V F+ DR +SV P Sbjct: 2 AHKKAGGSSRNGRDSDGRRLGVKRFGGQDVIPGNIIVRQRGTKWHPGTNVGMGKDHTLFALVEGKVTFQTKANDRTYVSVLP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_SULMW (50S ribosomal protein L27 OS=Sulcia muelleri (strain GWSS) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 264 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYP 509 AHKKG GS++NGRDS +RLGVK+FG Q+AKPG+II+RQRGTK HP KNV +GKDHTI SLI G + F+K + ISV P Sbjct: 2 AHKKGVGSSRNGRDSFSKRLGVKLFGGQIAKPGSIIIRQRGTKHHPKKNVYMGKDHTIHSLIYGKILFKKTNKKKSFISVIP 83
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_PARD8 (50S ribosomal protein L27 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 50/80 (62.50%), Postives = 66/80 (82.50%), Query Frame = -3 Query: 270 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISV 509 AHKKG GS+KNGR+S+ +RLGVK+FG +VAK G IIVRQRGT HPG+NVG+GKDHT+++L+DG+V F + +R +SV Sbjct: 2 AHKKGVGSSKNGRESQSKRLGVKLFGGEVAKAGNIIVRQRGTVHHPGENVGIGKDHTLYALVDGVVTFRRGKENRSFVSV 81
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_LACJO (50S ribosomal protein L27 OS=Lactobacillus johnsonii GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = -3 Query: 258 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPRE 509 AH KG GST NGR+S G+RLG K Q G+II RQRGTK HPGKNVG+G D T+F+L G+VKFE+ G DRKQ+SVYP E Sbjct: 13 AHHKGGGSTANGRNSAGRRLGAKRADGQKINAGSIIFRQRGTKIHPGKNVGIGGDDTLFALTSGVVKFERLGRDRKQVSVYPVE 96
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBM (50S ribosomal protein L27 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBL (50S ribosomal protein L27 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBK (50S ribosomal protein L27 OS=Clostridium botulinum (strain Okra / Type B1) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBJ (50S ribosomal protein L27 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95
BLAST of CN185203 vs. ExPASy Swiss-Prot
Match: RL27_CLOBH (50S ribosomal protein L27 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rpmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = -3 Query: 252 AHKKGAGSTKNGRDSRGQRLGVKIFGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQISVYPREVQ 509 AHKKG GS+KNGRDS +RLGVK Q G I+VRQRGTK HPG NVG G D T+F+ IDG+VK+E+ G D+K+ SVYP EV+ Sbjct: 10 AHKKGVGSSKNGRDSEAKRLGVKCSDGQFVLAGNILVRQRGTKIHPGLNVGRGGDDTLFAKIDGVVKYERLGRDKKKASVYPVEVE 95 The following BLAST results are available for this feature:
BLAST of CN185203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185203 ID=CN185203; Name=CN185203; organism=Citrus sinensis; type=EST; length=691bpback to top |