CN185202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: SUFB_SHIFL (FeS cluster assembly protein sufB OS=Shigella flexneri GN=sufB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 76/131 (58.02%), Postives = 104/131 (79.39%), Query Frame = -2 Query: 261 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 653 GKNT+S IISKGIS G+S+N YRGLV++ A NARN +QCDSML+G A+T+PY++ +N +A++EHEA+TS+IGEDQLFY QRGI E A++ +++GFC+DVF+ELP EF E +L+++ LE SVG Sbjct: 365 GKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 495
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: SUFB_ECOLI (FeS cluster assembly protein sufB OS=Escherichia coli (strain K12) GN=sufB PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 76/131 (58.02%), Postives = 104/131 (79.39%), Query Frame = -2 Query: 261 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 653 GKNT+S IISKGIS G+S+N YRGLV++ A NARN +QCDSML+G A+T+PY++ +N +A++EHEA+TS+IGEDQLFY QRGI E A++ +++GFC+DVF+ELP EF E +L+++ LE SVG Sbjct: 365 GKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 495
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: YCF24_CYACA (UPF0051 protein ycf24 OS=Cyanidium caldarium GN=ycf24 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36 Identity = 71/131 (54.20%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 261 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 653 G+ ++S +ISKGIS G S+N YRGLV++ A + N SQCDS+L+G + +NTYP + V N ++VEHEA S+IGE+Q+FYFQQRGI+ E+A+ ++SGFC+DV N+LP EF E N+L+++KLEGS+G Sbjct: 353 GRQSKSLVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGSESNTYPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDVCNKLPMEFALEANKLLNIKLEGSIG 483
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y1496_MYCBO (UPF0051 protein Mb1496 OS=Mycobacterium bovis GN=Mb1496 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.539e-27 Identity = 54/129 (41.86%), Postives = 86/129 (66.67%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK ++ G R YRGLVQV A +R+S +CD++L+ + ++TYPY+ ++ + HEA+ SK+ E+QLFY RG+ ++AMA ++ GF + ELP E+ E+N+L+ L++EG+VG Sbjct: 718 NTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 846
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y1461_MYCTU (UPF0051 protein Rv1461/MT1508 OS=Mycobacterium tuberculosis GN=Rv1461 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.539e-27 Identity = 54/129 (41.86%), Postives = 86/129 (66.67%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK ++ G R YRGLVQV A +R+S +CD++L+ + ++TYPY+ ++ + HEA+ SK+ E+QLFY RG+ ++AMA ++ GF + ELP E+ E+N+L+ L++EG+VG Sbjct: 718 NTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 846
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y593_MYCLE (UPF0051 protein ML0593 OS=Mycobacterium leprae GN=ML0593 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.331e-27 Identity = 54/129 (41.86%), Postives = 86/129 (66.67%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK ++ G R YRGLVQV A +R+S +CD++L+ + ++TYPY+ ++ + HEA+ SK+ E+QLFY RG+ ++AMA ++ GF + ELP E+ E+N+L+ L++EG+VG Sbjct: 741 NTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 869
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y610_STAES (UPF0051 protein SE_0610 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0610 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK IS + YRG+V KA+ AR++ +CD+++L + + ++T PY +V N +EHEA SK+ E+QLFY RGI E+A ++ GF ELP E+ E+N+L+ ++EGS+G Sbjct: 337 NTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y500_STAEQ (UPF0051 protein SERP0500 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0500 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK IS + YRG+V KA+ AR++ +CD+++L + + ++T PY +V N +EHEA SK+ E+QLFY RGI E+A ++ GF ELP E+ E+N+L+ ++EGS+G Sbjct: 337 NTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: Y2035_STAHJ (UPF0051 protein SH2035 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2035 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK IS + YRG+V KA+ AR++ +CD+++L + + ++T PY +V N +EHEA SK+ E+QLFY RGI E+A ++ GF ELP E+ E+N+L+ ++EGS+G Sbjct: 337 NTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
BLAST of CN185202 vs. ExPASy Swiss-Prot
Match: SUFB_BACSU (FeS cluster assembly protein sufB OS=Bacillus subtilis GN=sufB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = -2 Query: 261 NTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 647 NT S I+SK IS + YRG+V KAE AR++ +CD++++ + + ++T PY ++ N +EHEA SK+ E+QLFY RGI E+A ++ GF ELP E+ E+N+L+ ++EGS+G Sbjct: 337 NTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465 The following BLAST results are available for this feature:
BLAST of CN185202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185202 ID=CN185202; Name=CN185202; organism=Citrus sinensis; type=EST; length=654bpback to top |