EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 53/167 (31.74%), Postives = 86/167 (51.50%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL---------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  +  + + PTL    + +         +D+GG +  R  W++YF + +G+V++VD++D  R  + K EL++L K E LS    LIL NK D+  A+   E+   L L         +  + +R  ++   S     G  EGF WL Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYNTTGKDTGKLPEGSRPIEVYMVSVVMRSGYGEGFKWLSQYI 190          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.609e-18
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL--------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQ 555
            L +GLDN+GKTT++  +  +  +++SPT     + +         +D+GG +  R  W++YF +  G+V++VD+ D  R  + K ELD LL  E LS    L+L NK D   A++  E+   L L          ++  R  ++  CS    +G  EG  WL Q
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLSQ 187          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: AR13A_RAT (ADP-ribosylation factor-like protein 13A OS=Rattus norvegicus GN=Arl13a PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.609e-18
Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-DKTRHW-KIVGCSAYTG------EGLLEGFDWLVQDIASR 570
            +++GLDNSGK+ +V        S +   +     T+    Y ++++D+ G    R  W NY+ +  GLV+VVDSSD+ R+ + K+ L  L+ ++R+SG  +LILANKQD   AL P +I + L LE + ++T+   ++  CS          + ++ G  WL+  I  R
Sbjct:   25 IVIGLDNSGKSHLVAAFQRLIPSKMHSEMRPTQTTLLLDDYQVSVYDLTGDLKGREKWPNYYAEAHGLVFVVDSSDIARIQEVKIILTRLMFDKRVSGKPILILANKQDKKDALLPCDIIEYLLLERLVNETKSMCRVEPCSTIRNLPKRHQQPIVIGLRWLLAAIGDR 193          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  +  + + PT     + +         +D+GG    R  W++YF + +G+V++VD++D  R ++ ++ELD L +   L     +IL NK D   A++ TE+   L L        ++  R  ++  CS     G LE F WL Q I
Sbjct:   27 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL--------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQ 555
            L +GLDN+GKTT++  +  +  +++ PTL    + +         +D+GG +  R  W++YF + +G+V++VD+ D  R  + K ELD LL  E L+    +IL NK D   A++  E+   L L          ++  R  ++  CS    +G  EG  WL Q
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLSQ 187          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17
Identity = 51/166 (30.72%), Postives = 85/166 (51.20%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVG--------CSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  +  + + PT     + +         +D+GG    R  W++YF + +G+V++VD++D  R ++ ++ELD L + + L      +L NK D   A++ TE+   L L  M+ T + KI G        CS     G  E F WL + I
Sbjct:   27 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGL--MNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17
Identity = 49/167 (29.34%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-----------DKTRHWKIVGCSAYTGEGLLEGFDWLVQ 555
            + +GLDN+GKTT++  +  +  +   PTL    + ++    +   +D+GG    R  W++YF   D +V+++D +D  R+ + ++EL++LL++E+++   +LIL NK D  GAL+  ++   LN++ M             +R  ++  CS    +G  EG  WL Q
Sbjct:   25 VFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQ 191          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: AR13A_MOUSE (ADP-ribosylation factor-like protein 13A OS=Mus musculus GN=Arl13a PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17
Identity = 61/205 (29.76%), Postives = 108/205 (52.68%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-DKTRHW-KIVGCSAY------TGEGLLEGFDWLVQDIASRIYLLD*PVVVQEKIPKFAL*CEKRVWVMGQNHVRCM 678
            +++GLDNSGK+ ++        S +   +     T+    Y ++I+D+ G    R  W +Y+ Q  GL++VVDSSD+ R+ + K+ L  ++ ++R+SG  +LILANKQD   AL P +I + L LE + ++TR   ++  CS          + ++ G  WL+  I  +   L      +++IP  ++   K +   G+   RC+
Sbjct:   25 IVIGLDNSGKSRLIEAFQRLIPSKMHKEMRPTQTTLLLDDYQVSIYDLTGDVKGREKWSSYYAQAHGLIFVVDSSDIARIQEVKIILTRIMFDKRVSGKPILILANKQDKKNALLPCDIIEYLLLERLVNETRSMCRVEPCSTIKRIPKRQQKPIVVGLRWLLAAIGDQYSEL----YTRQQIPNMSISTSKNIRGCGE---RCL 222          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.141e-17
Identity = 52/169 (30.77%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD-----------KTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            + +GLDN+GKTT++  +  +      PTL    + +T    T   +D+GG    R  W+NY    +G+V++VD +D  RL + K+EL+ L+ +E +S   +LIL NK D   A++  ++ ++  L                 R  ++  CS    +G  EGF WL Q I
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.141e-17
Identity = 52/169 (30.77%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD-----------KTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            + +GLDN+GKTT++  +  +      PTL    + +T    T   +D+GG    R  W+NY    +G+V++VD +D  RL + K+EL+ L+ +E +S   +LIL NK D   A++  ++ ++  L                 R  ++  CS    +G  EGF WL Q I
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
SAR1_PICST7.357e-1831.74Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]
SAR1_EMENI9.609e-1831.71Small COPII coat GTPase sar1 OS=Emericella nidulan... [more]
AR13A_RAT9.609e-1833.14ADP-ribosylation factor-like protein 13A OS=Rattus... [more]
SAR1_ASHGO1.255e-1730.49Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN... [more]
SAR1_MAGGR1.639e-1731.10Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_KLULA1.639e-1730.72Small COPII coat GTPase SAR1 OS=Kluyveromyces lact... [more]
SAR1_CAEEL1.639e-1729.34GTP-binding protein SAR1 OS=Caenorhabditis elegans... [more]
AR13A_MOUSE1.639e-1729.76ADP-ribosylation factor-like protein 13A OS=Mus mu... [more]
SAR1A_PONAB2.141e-1730.77GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN2.141e-1730.77GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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