EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.812e-16
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD-----------KTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            + +GLDN+GKTT++  +  +      PTL    + +T    T   +D+GG    R  W+NY    +G+V++VD +D  RL + K ELD+L+ +E ++   +LIL NK D   A++   + ++  L                 R  ++  CS    +G  EGF W+ Q I
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL---------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  +  + + PTL    + +         +D+GG +  R  W++YF + +G+V++VD++D  R  + K EL++L K E LS    +IL NK D+  A+   E+   L L         +  +  R  ++   S     G  + F WL Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYNTTGKDTGKLPEGQRPIEVFMVSVVMRSGYGDAFKWLSQYI 190          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD-----------KTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            + +GLDN+GKTT++  +  +      PTL    + +T    T   +D+GG    R  W+NY    +G+V++VD +D  RL + K ELD+L+ +E ++   +LIL NK D   A++   + ++  L                 R  ++  CS    +G  EGF W+ Q I
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD-----------KTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            + +GLDN+GKTT++  +  +      PTL    + +T    T   +D+GG    R  W+NY    +G+V++VD +D  RL + K ELD+L+ +E ++   +LIL NK D   A++   + ++  L                 R  ++  CS    +G  EGF W+ Q I
Sbjct:   29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-----------DKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  E      PT     + ++  K     +D+GG +  R  W++Y+ + D +V++VD+ D  R  + K ELD LL +E L+    LIL NK DI  A +  E+   L L                 R  ++  CS     G  EGF WL Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16
Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-----------DKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  E      PT     + ++  K     +D+GG +  R  W++Y+ + D +V++VD+ D  R  + K ELD LL +E L+    LIL NK DI  A +  E+   L L                 R  ++  CS     G  EGF W+ Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYI 192          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.273e-16
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM-----------DKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  E      PT     + ++  K     +D+GG +  R  W++Y+ + D +V++VD+ D  R  + K ELD LL +E L+    LIL NK DI  A +  E+   L L                 R  ++  CS     G  EGF WL Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.886e-16
Identity = 49/164 (29.88%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL--------EAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQ 555
            L +GLDN+GKTT++  +  +  +++ PT     + +         +D+GG +  R  W++YF +  G+V++VD+ D     + K ELD LL  E L+    LIL NK D   A++  ++   L L          ++  R  ++  CS    +G  EG  WL Q
Sbjct:   24 LFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLSQ 187          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 45/164 (27.44%), Postives = 79/164 (48.17%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAM----------DKTRHWKIVGCSAYTGEGLLEGFDWL 549
            + VGLDN+GK+T++  +    T+ ++PT     + +         +D+GG    R  W  Y   +DG+V++VDS+D  R ++ +  L  LL    L+   +LIL+NK DI  A++   + +   ++ +             R  ++  CS     G  +GF WL
Sbjct:   24 VFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRSDQRPLEVFPCSVINRFGYTDGFKWL 187          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 45/141 (31.91%), Postives = 85/141 (60.28%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDT-SVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCS 507
            L++GLD +GK+T +  ++G+       PT GFN   +  + + +++ ++GG + +R YW+ +  + D LV+VVDS+D  RL   + EL  LL ++      ++++ANKQD++ A++  E+ + L L+A+D  R   ++  S
Sbjct:   81 LVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKD--PDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAAS 219          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
SAR1B_CRIGR1.812e-1630.18GTP-binding protein SAR1b OS=Cricetulus griseus GN... [more]
SAR1_LODEL2.367e-1629.94Small COPII coat GTPase SAR1 OS=Lodderomyces elong... [more]
SAR1B_PIG2.367e-1630.18GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B P... [more]
SAR1B_BOVIN2.367e-1630.18GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B P... [more]
SAR1A_BRACM2.367e-1632.54GTP-binding protein SAR1A OS=Brassica campestris G... [more]
SAR1A_ARATH3.091e-1631.95GTP-binding protein SAR1A OS=Arabidopsis thaliana ... [more]
SAR1B_ARATH5.273e-1632.54GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
SAR1_ASPNG6.886e-1629.88Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_GIALA1.534e-1527.44GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]
ARL10_HUMAN1.534e-1531.91ADP-ribosylation factor-like protein 10 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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