EY666528

Overview
NameEY666528
Unique NameEY666528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15
Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEI-------------AKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            L +GLDN+GKTT++  +  E      PT     + ++  K     +D+GG +  R  W++Y+ + D +V++VD+ D  R  + K ELD LL ++ L+    LIL NK D   A +  E+              KV         R  ++  CS     G  EGF WL Q I
Sbjct:   24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15
Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 1
Query:   91 MVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVL----NLE---------AMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 561
            M+GLD +GKTT++L +   +     PTLGFN + VT       +WD+GGQ +   +W  Y  +  G++++VD +D +R      EL  +L     S   LL+LANK D+      +E+ K +    NLE          +   +   +   +   G  +++ F WL +++
Sbjct:   30 MIGLDGAGKTTLLLYLQTGEVHQTVPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILNILN-SPRPLLVLANKIDLIREHERSEVVKSIRNEFNLERYNGPSQVVPISVLQAGSMTSANDENGREIIDAFRWLNKEL 198          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 50/162 (30.86%), Postives = 77/162 (47.53%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNL--------EAMDKTRHWKIVGCSAYTGEGLLEGFDWL 549
            L +GLDN+GKTT++  +     S   PT     + +         +D+GG  + R  W++Y+   D +V+++DSS   R  + K ELD+LL  + L+    LIL NK DI G  +  +    L L          ++  R  ++  CS     G  EGF WL
Sbjct:   24 LFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDI-GNTSEEKFRASLGLTQTTGKGKTTLNGVRPIEVFMCSVVKRYGYAEGFRWL 184          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.215e-14
Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGED-TSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCS-AYTGEGLLE 534
            L++GLD SGK+T +  + G+       PT GFN   +  + + +++ ++G  + +R YW+ +  + D LV++VDS+D  RL   + EL  LL  +R     ++I+ANKQD++GA+   E+ + L L A    R   ++  S A  G G  E
Sbjct:   80 LVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLL--DRDPDLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.445e-14
Identity = 49/166 (29.52%), Postives = 90/166 (54.22%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKI------NGEDTSVIS-----PTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYF-EQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 549
            +++G++N GKTT++  I      N   T++ S     PT GFN++++  ++   +IWD+GG+ T R  +R+Y   + D +++V DSSD+  L++ K E   L  +  L     L++ANKQD+       EI ++L     DK+   + +  S    + L++  +W+
Sbjct:   21 MILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLK--QQTIEIDEILK-TYFDKSSINETILMSQNNNDDLIKCINWI 183          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 49/162 (30.25%), Postives = 87/162 (53.70%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIV-LKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGL-VWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMD------KTRHWKIVGCSAYTGEGLLEGFDWL 549
            +++GL N+GKTT++ L + G   S I PTL  N ++ TY       +D+GGQ+ +R  W+ Y   +  + V++VDSSD   + + K E+ ++L +E LS + LLIL +K D  G      +  +L++   +          + ++  S+ T  G+ +  +WL
Sbjct:   24 VIIGLGNAGKTTLLHLLVTGSLKSHI-PTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELGLNNSNNVPFDLIMTSSITRYGITDMLNWL 184          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTS-VISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVG 501
            L++GLD +GKT+++  +        ++PT GF+   +  +   +   ++GG +  RSYW  Y  +   L++VVDS+D  RL + K  L  L+    +    L++ ANKQD+  A   T+I + L L  +   R   + G
Sbjct:   22 LVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKMFLFG 158          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: ARFL_DICDI (ADP-ribosylation factor L OS=Dictyostelium discoideum GN=arrL PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 41/164 (25.00%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   91 MVGLDNSGKTTIVLK-INGEDTSVISPTL---GFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGALTPTEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 570
            ++GL+NSGKTT++ K I+      I+  L   G  I+++ ++ + +   D+     I   ++ Y   +D +++++DSSD+ ++ + K ++D L++E+ ++ +  L++ANKQD    ++  ++ + L L  +  T  WK +  S    +G+ +   W++++   R
Sbjct:   23 IIGLENSGKTTLLNKFIDASSKKSIASVLISTGVYIESIIFKGWEIFAGDLLYPNYISKIYKPYLLGSDVIIFMIDSSDIHQMTEAKNQIDLLIQEQCINSSVFLVMANKQDQKRCVSIHQLEQYLELYRL--TNPWKCLPLSLIQEKGIEDLIKWILENTVVR 184          
BLAST of EY666528 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = 1
Query:   88 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDING 423
            L +G+DN+GKTT+V K+  + T V  PT   +   +        + D+GG    R  WR+YF    G+V++VD  D+ R  + +   + +L  E+   A +++L NK D+ G
Sbjct:   39 LFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLEK--RAPVVVLMNKIDLEG 148          
The following BLAST results are available for this feature:
BLAST of EY666528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
SAR1B_BRACM3.418e-1530.99GTP-binding protein SAR1B OS=Brassica campestris G... [more]
ARF_ENCCU7.614e-1528.82ADP-ribosylation factor OS=Encephalitozoon cunicul... [more]
SAR1A_DICDI1.299e-1430.86GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
ARL10_MOUSE2.215e-1433.11ADP-ribosylation factor-like protein 10 OS=Mus mus... [more]
ARLX_DICDI6.445e-1429.52ADP-ribosylation factor-like protein DDB_G0292332 ... [more]
SAR1B_DICDI2.449e-1330.25GTP-binding protein Sar1B OS=Dictyostelium discoid... [more]
ARL9_HUMAN4.619e-1230.22ADP-ribosylation factor-like protein 9 OS=Homo sap... [more]
ARFL_DICDI7.879e-1225.00ADP-ribosylation factor L OS=Dictyostelium discoid... [more]
SAR1_ENCCU1.755e-1132.14Small COPII coat GTPase SAR1 OS=Encephalitozoon cu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666528 ID=EY666528; Name=EY666528; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGTCGTCAGCCGCACAAGAAATGGGGCTCCTCAGCATCAT
AAGGAAGATCAAGAAAAAAGAGAAGGAAATGCGCATTCTTATGGTGGGTC
TTGATAATTCTGGGAAGACCACAATTGTTTTGAAGATAAACGGAGAAGAT
ACTAGCGTTATCAGTCCTACACTTGGATTCAATATCAAAACCGTTACTTA
CCAAAAGTACACTTTAAACATATGGGATGTAGGAGGCCAAAGGACTATAA
GATCATATTGGAGGAACTACTTTGAGCAAACTGATGGTTTGGTGTGGGTG
GTTGATAGTTCCGATCTTAGAAGACTGGATGATTGCAAAATGGAACTAGA
CAATCTTTTAAAGGAAGAGAGGCTATCAGGGGCATCCTTACTGATTCTAG
CAAATAAGCAGGACATCAATGGTGCTCTTACCCCAACAGAGATTGCTAAA
GTTCTGAACTTGGAAGCCATGGACAAAACTCGACACTGGAAAATTGTGGG
TTGCAGTGCCTACACAGGTGAGGGACTGCTAGAGGGATTTGATTGGTTAG
TTCAGGACATTGCCTCCCGGATCTACCTTCTTGACTAACCCGTTGTTGTA
CAAGAAAAAATTCCTAAATTTGCCTTGTAATGTGAAAAAAGAGTGTGGGT
TATGGGACAAAACCATGTGAGATGTATGCCCATGTGATTGATTGGCTCAT
GAGCTGTATCTGGTGTACAAGAATGAAACCGTTGGGTAAAATGGGGTCCT
TTTTCAGCTGAAATGGTTGGCCAAAAACAAGAATATGACCAAATGGATTT
GAAAATAATTACTTTTTTCCCAAAAAAAAAAAAA
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